Os12g0403800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Exoribonuclease domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0403800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Exoribonuclease domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.02 | 0.21 | 9.68 | -0.0484 | 0.544 | -0.64 | -0.0146 | 1.14 | 0.152 | 21.1 | 27.2 | 7228 | -- | -- |
| 22.17 | 0.219 | 9.7 | -0.248 | 0.548 | -0.635 | -0.0318 | -- | 0.186 | 21 | 25.89 | 14293 | -- | -- |
| 20.01 | 0.208 | 9.68 | -0.0468 | 0.543 | -0.639 | -- | 1.14 | 0.154 | 21.1 | 27.2 | 7227 | -- | -- |
| 22.04 | 0.219 | 9.7 | -0.132 | 0.563 | -0.678 | -- | -- | 0.146 | 21 | 24.5 | 22984 | -- | -- |
| 37.13 | 0.284 | 9.68 | -0.0296 | -- | -0.628 | -- | 1.13 | 0.136 | -- | 27.12 | 7227 | -- | -- |
| 33.32 | 0.271 | 9.77 | -0.684 | 0.54 | -- | -0.0363 | -- | -0.158 | 20.9 | -- | -- | -- | -- |
| 33.33 | 0.27 | 9.77 | -0.683 | 0.54 | -- | -- | -- | -0.158 | 20.9 | -- | -- | -- | -- |
| 38.74 | 0.29 | 9.69 | -0.00208 | -- | -0.727 | -- | -- | 0.151 | -- | 23 | 24584 | -- | -- |
| 21.37 | 0.215 | 9.71 | -- | 0.535 | -0.731 | -- | -- | 0.132 | 21.2 | 22.9 | 23578 | -- | -- |
| 50.01 | 0.33 | 9.76 | -0.682 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 45.61 | 0.316 | 9.76 | -- | 0.541 | -- | -- | -- | -0.0822 | 20.8 | -- | -- | -- | -- |
| 38.73 | 0.29 | 9.69 | -- | -- | -0.73 | -- | -- | 0.145 | -- | 22.93 | 24558 | -- | -- |
| 62.29 | 0.368 | 9.74 | -- | -- | -- | -- | -- | -0.0861 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.93 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 2 | 19.93 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 7 | 20.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 10 | 20.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 16 | 20.16 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 34 | 20.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 63 | 20.34 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 142 | 20.45 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 285 | 20.57 | temperature | 25 | 14400 | > th | dose dependent | sin | 18 | NA |
| 401 | 20.68 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 450 | 20.71 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 581 | 20.78 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 658 | 20.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 19 |
| 667 | 20.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 777 | 20.96 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 816 | 21.00 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 853 | 21.03 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 6 |
| 860 | 21.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 893 | 21.10 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 18 |
| 928 | 21.14 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 957 | 21.16 | temperature | 25 | 14400 | > th | dose independent | sin | 4 | NA |
| 958 | 21.16 | temperature | 25 | 14400 | < th | dose independent | sin | 4 | NA |
| 962 | 21.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 991 | 21.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 996 | 21.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 23 |