Os12g0225900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0225900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.14 | 0.542 | 4.08 | -1.92 | 0.0392 | -1.74 | -1.02 | 3.63 | -0.799 | 6.9 | 19.3 | 3845 | -- | -- |
| 139.34 | 0.55 | 4.18 | -2.59 | 0.115 | -2.02 | -1.02 | -- | -0.878 | 7.4 | 13.68 | 7133 | -- | -- |
| 135.67 | 0.542 | 4.08 | -1.92 | 0.0121 | -1.75 | -- | 3.73 | -0.787 | 6.68 | 19.3 | 3675 | -- | -- |
| 141.74 | 0.554 | 4.18 | -2.65 | 0.144 | -1.81 | -- | -- | -0.888 | 9.04 | 15.92 | 7135 | -- | -- |
| 135.68 | 0.543 | 4.08 | -1.93 | -- | -1.76 | -- | 3.72 | -0.787 | -- | 19.3 | 3675 | -- | -- |
| 211.67 | 0.682 | 4.3 | -3.65 | 0.147 | -- | -0.823 | -- | -1.43 | 8.78 | -- | -- | -- | -- |
| 212.94 | 0.683 | 4.3 | -3.67 | 0.19 | -- | -- | -- | -1.42 | 11.7 | -- | -- | -- | -- |
| 142.79 | 0.557 | 4.18 | -2.66 | -- | -1.86 | -- | -- | -0.881 | -- | 15.76 | 7133 | -- | -- |
| 159.37 | 0.588 | 3.99 | -- | 0.126 | -3.25 | -- | -- | -0.0419 | 11 | 6.467 | 47520 | -- | -- |
| 215.2 | 0.685 | 4.3 | -3.67 | -- | -- | -- | -- | -1.42 | -- | -- | -- | -- | -- |
| 567.69 | 1.11 | 4.2 | -- | 0.24 | -- | -- | -- | -1.01 | 12.6 | -- | -- | -- | -- |
| 160.36 | 0.59 | 3.99 | -- | -- | -3.26 | -- | -- | -0.0408 | -- | 0.05871 | 47520 | -- | -- |
| 571.3 | 1.12 | 4.21 | -- | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.05 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 2 | 126.12 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 3 | 126.15 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 6 | 126.17 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 23 | 126.44 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 50 | 126.83 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 55 | 126.84 | radiation | 30 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 63 | 126.88 | radiation | 30 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 71 | 126.94 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 73 | 126.95 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 78 | 126.98 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 83 | 127.00 | radiation | 30 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 87 | 127.03 | radiation | 30 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 112 | 127.16 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 120 | 127.21 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 124 | 127.22 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 151 | 127.35 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 20 |
| 157 | 127.38 | temperature | 20 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 160 | 127.40 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 163 | 127.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 166 | 127.42 | temperature | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 171 | 127.44 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 180 | 127.47 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 198 | 127.49 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 201 | 127.49 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 202 | 127.50 | temperature | 20 | 43200 | > th | dose independent | sin | 11 | NA |
| 220 | 127.55 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 234 | 127.57 | radiation | 1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 284 | 127.68 | radiation | 1 | 43200 | < th | dose dependent | sin | 9 | NA |
| 307 | 127.73 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 337 | 127.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 379 | 127.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 446 | 128.04 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 448 | 128.04 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 452 | 128.04 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 7 |
| 535 | 128.23 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 678 | 128.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 758 | 128.85 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 759 | 128.86 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 763 | 128.86 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 774 | 128.88 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 20 |
| 775 | 128.88 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 788 | 128.91 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 808 | 128.92 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 880 | 129.02 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 941 | 129.14 | radiation | 10 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 943 | 129.14 | radiation | 10 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 967 | 129.18 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 1 |