Os12g0204500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF579, plant family protein.
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Os12g0204500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF579, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.1 | 0.538 | 8.25 | -0.859 | 1.74 | 0.947 | -0.461 | -0.359 | -0.593 | 18.1 | 24.8 | 8 | -- | -- |
| 131.15 | 0.537 | 8.26 | -0.909 | 1.73 | 0.982 | -0.433 | -- | -0.608 | 18.1 | 24.61 | 5 | -- | -- |
| 131.49 | 0.538 | 8.25 | -0.861 | 1.73 | 0.958 | -- | -0.302 | -0.595 | 18.1 | 24.8 | 8 | -- | -- |
| 131.61 | 0.538 | 8.26 | -0.904 | 1.73 | 0.988 | -- | -- | -0.609 | 18.1 | 24.6 | 4 | -- | -- |
| 282.79 | 0.788 | 8.24 | -0.962 | -- | 0.876 | -- | -0.274 | -0.697 | -- | 23.2 | 5 | -- | -- |
| 145.38 | 0.565 | 8.3 | -1.14 | 1.69 | -- | -0.495 | -- | -0.788 | 18.5 | -- | -- | -- | -- |
| 145.99 | 0.566 | 8.3 | -1.13 | 1.69 | -- | -- | -- | -0.789 | 18.5 | -- | -- | -- | -- |
| 282.91 | 0.787 | 8.24 | -0.992 | -- | 0.909 | -- | -- | -0.703 | -- | 23.2 | 7 | -- | -- |
| 151.24 | 0.576 | 8.23 | -- | 1.76 | 1.33 | -- | -- | -0.455 | 18 | 24.6 | 4 | -- | -- |
| 294.6 | 0.802 | 8.27 | -1.17 | -- | -- | -- | -- | -0.824 | -- | -- | -- | -- | -- |
| 179.84 | 0.627 | 8.28 | -- | 1.7 | -- | -- | -- | -0.663 | 18.5 | -- | -- | -- | -- |
| 307.07 | 0.819 | 8.21 | -- | -- | 1.25 | -- | -- | -0.554 | -- | 23.2 | 7 | -- | -- |
| 331.01 | 0.849 | 8.24 | -- | -- | -- | -- | -- | -0.694 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 11 |
| 4 | 125.72 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 11 |
| 11 | 126.54 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 10 |
| 14 | 126.80 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 12 |
| 16 | 127.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 20 | 127.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 16 |
| 34 | 127.43 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 10 |
| 36 | 127.49 | temperature | 25 | 90 | < th | dose dependent | sin | 11 | NA |
| 40 | 127.54 | temperature | 25 | 10 | < th | dose dependent | sin | 11 | NA |
| 52 | 127.76 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 62 | 127.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 10 |
| 101 | 128.30 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 12 |
| 133 | 128.65 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 20 |
| 142 | 128.67 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 13 |
| 164 | 128.81 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 18 |
| 225 | 129.12 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 16 |
| 250 | 129.31 | temperature | 20 | 30 | > th | dose independent | rect. | 9 | 21 |
| 264 | 129.41 | temperature | 15 | 90 | > th | dose dependent | sin | 11 | NA |
| 365 | 129.91 | temperature | 15 | 10 | > th | dose dependent | sin | 11 | NA |
| 461 | 130.34 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 9 |
| 473 | 130.41 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 485 | 130.46 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 23 |
| 487 | 130.47 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 505 | 130.54 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 529 | 130.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 538 | 130.67 | radiation | 40 | 720 | < th | dose independent | rect. | 3 | 6 |
| 554 | 130.75 | temperature | 20 | 10 | < th | dose independent | rect. | 18 | 11 |
| 557 | 130.78 | wind | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 570 | 130.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 582 | 130.85 | temperature | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 585 | 130.85 | radiation | 40 | 720 | < th | dose independent | rect. | 19 | 14 |
| 592 | 130.88 | wind | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 615 | 130.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 643 | 131.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 645 | 131.07 | wind | 1 | 1440 | < th | dose dependent | rect. | 6 | 13 |
| 659 | 131.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 665 | 131.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 667 | 131.12 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 668 | 131.13 | wind | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 702 | 131.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 704 | 131.20 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 707 | 131.21 | wind | 1 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 730 | 131.27 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 739 | 131.29 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 769 | 131.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 797 | 131.46 | wind | 1 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 856 | 131.57 | wind | 1 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 900 | 131.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 902 | 131.69 | wind | 1 | 1440 | < th | dose dependent | rect. | 10 | 8 |
| 932 | 131.75 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 972 | 131.80 | wind | 1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 991 | 131.82 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 993 | 131.83 | wind | 1 | 1440 | < th | dose independent | rect. | 10 | 3 |