BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0204500 Os12g0204500|AK069867
(295 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33800.1 | chr1:12261480-12262456 FORWARD LENGTH=298 266 8e-72
AT1G09610.1 | chr1:3111789-3112637 FORWARD LENGTH=283 266 1e-71
AT4G09990.1 | chr4:6259110-6260064 REVERSE LENGTH=291 261 2e-70
AT1G71690.1 | chr1:26947806-26949064 FORWARD LENGTH=296 256 1e-68
AT1G67330.1 | chr1:25214118-25214993 FORWARD LENGTH=292 209 2e-54
AT1G27930.1 | chr1:9731510-9732379 REVERSE LENGTH=290 197 7e-51
AT5G67210.1 | chr5:26819019-26819972 FORWARD LENGTH=318 140 9e-34
AT3G50220.1 | chr3:18617672-18618640 REVERSE LENGTH=323 139 2e-33
AT2G15440.1 | chr2:6743792-6744781 REVERSE LENGTH=330 136 2e-32
AT4G24910.1 | chr4:12817954-12818901 REVERSE LENGTH=316 106 1e-23
>AT1G33800.1 | chr1:12261480-12262456 FORWARD LENGTH=298
Length = 297
Score = 266 bits (681), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 155/230 (67%), Gaps = 5/230 (2%)
Query: 66 CGKLPAAVAQAMVHYATANVTPQQTAAEIGVSLRVLQLRAPCNFLVFGLGLDSAMWAALN 125
C K+P +++ A+VHY T+NVTPQQT E+ VS RVL ++PCNFLVFGLG DS MWA+LN
Sbjct: 66 CTKMPLSLSDALVHYVTSNVTPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLN 125
Query: 126 HGGRTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELIALRHEPACTSQPDLXXX 185
HGGRT+F+EED +WIA V P LESYHV YDT+V D+D+L+ L C S D
Sbjct: 126 HGGRTLFIEEDQAWIAIVTKKFPNLESYHVVYDTKVKDSDKLMELGRSEECRSVSD---P 182
Query: 186 XXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXXX 245
C LAL+ P F+E +WDLIMVDAPTG+ E+PGRM AIY
Sbjct: 183 RNSKCDLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIY--TAGLLARNREDGET 240
Query: 246 EVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPSHRDKDGTPFCP 295
+VFVHDV+R VED FS FLC GY+ EQ GR+R F IPSHR + G PFCP
Sbjct: 241 DVFVHDVNRPVEDEFSATFLCKGYMREQNGRLRHFTIPSHRARAGRPFCP 290
>AT1G09610.1 | chr1:3111789-3112637 FORWARD LENGTH=283
Length = 282
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 128/234 (54%), Positives = 161/234 (68%), Gaps = 8/234 (3%)
Query: 66 CGKLPAAVAQAMVHYATANVTPQQTAAEIGVSLRVLQLRAPCNFLVFGLGLDSAMWAALN 125
C KLP ++AQA++HY+T+ +TPQQT EI VS RVL ++PCNFLVFGLG DS MW++LN
Sbjct: 53 CNKLPRSLAQALIHYSTSVITPQQTLKEIAVSSRVLGKKSPCNFLVFGLGHDSLMWSSLN 112
Query: 126 HGGRTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELIALRHEPACTSQPDLXXX 185
+GGRTVFLEED +WI +K P LESYHV YD++V AD LI + P CT+ D
Sbjct: 113 YGGRTVFLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGKGPECTAIGD---P 169
Query: 186 XXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXXX 245
C+LAL+GLP +E WDLIMVDAPTG+ E+PGRM AIY
Sbjct: 170 RYSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIY-TAGMMARNRKQGGET 228
Query: 246 EVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPSHRD----KDGTPFCP 295
+VFVHDV+R +ED FSKAFLC+GY+ +Q GR+R F+IPS+RD + PFCP
Sbjct: 229 DVFVHDVNREIEDKFSKAFLCEGYMKKQEGRLRHFIIPSYRDGSESESNRPFCP 282
>AT4G09990.1 | chr4:6259110-6260064 REVERSE LENGTH=291
Length = 290
Score = 261 bits (668), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 66 CGKLPAAVAQAMVHYATANVTPQQTAAEIGVSLRVLQLRAPCNFLVFGLGLDSAMWAALN 125
C KLP +++ A+VHY T+ +TPQQT E+ VS RVL ++PCNFLVFGLG DS MWA+LN
Sbjct: 58 CTKLPTSLSDALVHYVTSEITPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLN 117
Query: 126 HGGRTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELIALRHEPACTSQPDLXXX 185
HGGRT+FLEED +WI +V P LESYHV YDT+V D+++L+ L+ C + D
Sbjct: 118 HGGRTLFLEEDEAWIETVTKKFPNLESYHVVYDTKVKDSNKLMELKRTEDCKAVSD---P 174
Query: 186 XXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXXX 245
C L+L+G P +E +WD+IMVDAPTG+ E+PGRM AIY
Sbjct: 175 RDSKCALSLKGFPADVYETQWDVIMVDAPTGYHDEAPGRMSAIY-TAGLLARNRYDGGET 233
Query: 246 EVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPSHRDKDGTPFCP 295
+VFVHD++R VED FS AFLC GY+ EQ GR+R F IPSHR GTPFCP
Sbjct: 234 DVFVHDINRPVEDEFSVAFLCGGYMKEQQGRLRHFNIPSHRASFGTPFCP 283
>AT1G71690.1 | chr1:26947806-26949064 FORWARD LENGTH=296
Length = 295
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/235 (53%), Positives = 154/235 (65%), Gaps = 7/235 (2%)
Query: 65 GCGKLPAAVAQAMVHYATANVTPQQTAAEIGVSLRVLQLRAPCNFLVFGLGLDSAMWAAL 124
C K+P ++A A+VHYA++NVTPQQT +EI V+ + L+ ++PCNFLVFGLG DS MWA L
Sbjct: 64 SCNKIPPSLADALVHYASSNVTPQQTLSEISVTKKELEKKSPCNFLVFGLGHDSLMWATL 123
Query: 125 NHGGRTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELI-ALRHEPACTS-QPDL 182
NHGGRT+FL+ED SWI + P LESYHV Y T+V DA+ L+ A + C DL
Sbjct: 124 NHGGRTIFLDEDESWIHQIAEKFPSLESYHVRYKTKVRDAEALMAATKDREECRRVSTDL 183
Query: 183 XXXXXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXX 242
+C LAL+GLP V +E EWDLIMVDAPTG+ E+PGRM AIY
Sbjct: 184 ---RVSTCELALKGLPEVVYETEWDLIMVDAPTGFHEEAPGRMSAIYTAGMIARRRKDEE 240
Query: 243 XXXEVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPSHRDK--DGTPFCP 295
VFVHDVDR VED FS FLC Y+ +Q GR+R F +PSHR+ G FCP
Sbjct: 241 ETTAVFVHDVDRKVEDEFSMEFLCRDYMTKQEGRLRHFTVPSHRNYGVSGVKFCP 295
>AT1G67330.1 | chr1:25214118-25214993 FORWARD LENGTH=292
Length = 291
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/224 (47%), Positives = 137/224 (61%), Gaps = 5/224 (2%)
Query: 75 QAMVHYATANVTPQQTAAEIGVSLRVLQLRAPCNFLVFGLGLDSAMWAALNHGGRTVFLE 134
Q++VHYAT++ PQQ+ EI +SL VL+ R PCNFLVFGLG DS MWA+LN GG TVFLE
Sbjct: 69 QSIVHYATSHTVPQQSFEEISISLNVLKERLPCNFLVFGLGRDSLMWASLNPGGTTVFLE 128
Query: 135 EDASWIASVKAGHPGLESYHVAYDTRVTDADELIA-LRHEPACTSQPDLXXXXXXSCRLA 193
ED WI +V P L ++HV Y T +++A L++ ++EP C C LA
Sbjct: 129 EDPEWIEAVLKDAPSLRAHHVQYRTHLSEAGRLLSTYKNEPMCLPAKAFPIRYNEKCPLA 188
Query: 194 LRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXXXEVFVHDVD 253
L LP F++ EWDLIMVDAP G+ PE+PGRM AI+ VF+HDV+
Sbjct: 189 LTSLPDEFYDTEWDLIMVDAPKGYFPEAPGRMAAIF-SSAIMARNRKGDGTTHVFLHDVN 247
Query: 254 RHVEDTFSKAFLCDGYLVEQVGRIRRFVIP---SHRDKDGTPFC 294
R VE+ F+ FLC+ Y V VGR+ F IP + D+ G FC
Sbjct: 248 RKVENAFANEFLCEKYKVNSVGRLWHFEIPNAANMTDQPGDRFC 291
>AT1G27930.1 | chr1:9731510-9732379 REVERSE LENGTH=290
Length = 289
Score = 197 bits (500), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 127/210 (60%), Gaps = 3/210 (1%)
Query: 75 QAMVHYATANVTPQQTAAEIGVSLRVLQLRAPCNFLVFGLGLDSAMWAALNHGGRTVFLE 134
QA+VHYAT+NV PQQ AEI +S +L+ AP NFLVFGLG DS MWA+LN G+T+FLE
Sbjct: 66 QAIVHYATSNVVPQQNLAEISISFNILKKLAPANFLVFGLGRDSLMWASLNPRGKTLFLE 125
Query: 135 EDASWIASVKAGHPGLESYHVAYDTRVTDADELI-ALRHEPACTSQPDLXXXXXXSCRLA 193
ED W V P L ++HV Y T++ AD L+ + + EP C C+LA
Sbjct: 126 EDLEWFQKVTKDSPFLRAHHVRYRTQLQQADSLLRSYKTEPKCFPAKSY-LRGNEKCKLA 184
Query: 194 LRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXXXEVFVHDVD 253
L GLP F++ EWDL+MVDAP G+ E+PGRM AI+ VF+HDV+
Sbjct: 185 LTGLPDEFYDTEWDLLMVDAPKGYFAEAPGRMAAIF-SAAVMARNRKKPGVTHVFLHDVN 243
Query: 254 RHVEDTFSKAFLCDGYLVEQVGRIRRFVIP 283
R VE TF++ FLC Y V GR+ F IP
Sbjct: 244 RRVEKTFAEEFLCRKYRVNAAGRLWHFAIP 273
>AT5G67210.1 | chr5:26819019-26819972 FORWARD LENGTH=318
Length = 317
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 3/230 (1%)
Query: 67 GKLPAAVAQAMVHYAT-ANVTPQQTAAEI-GVSLRVLQLRAPCNFLVFGLGLDSAMWAAL 124
+LP AM+HYA+ +N + + E+ +S + + PCN LVFGL ++ +W +L
Sbjct: 75 SQLPTTAINAMLHYASRSNDSYHMSYGEMKSISDVLRRCSPPCNLLVFGLTHETLLWKSL 134
Query: 125 NHGGRTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELIALRHEPACTSQPDLXX 184
NH GRTVF+EE+ + A + HP +E + V Y T+ +A EL++ E A +
Sbjct: 135 NHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREARELVSAVKEAARNECRPVQN 194
Query: 185 XXXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXX 244
C+L L LP ++V+WD+I+VD P G + PGRM +I+
Sbjct: 195 LLFSDCKLGLNDLPNHVYDVDWDVILVDGPRGDGGDVPGRMSSIFTAAVLARSKKGGNPK 254
Query: 245 XEVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPSHRDKDGTPFC 294
VFVHD R VE FLC LVE + +V+ DK+ T FC
Sbjct: 255 THVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHYVLEK-MDKNSTQFC 303
>AT3G50220.1 | chr3:18617672-18618640 REVERSE LENGTH=323
Length = 322
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 68 KLPAAVAQAMVHYAT-ANVTPQQTAAEIGVSLRVLQLRAP-CNFLVFGLGLDSAMWAALN 125
LP + A++HYA+ +N + + E+ VL+ AP CN LVFGL ++ +W +LN
Sbjct: 83 NLPTSAINALLHYASRSNDSFHMSYGEMKSISDVLRRCAPPCNLLVFGLTHETLLWKSLN 142
Query: 126 HGGRTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELIALRHEPACTSQPDLXXX 185
H GRTVF+EE+ + A + HP ++ + V Y T+ +A EL+ E A +
Sbjct: 143 HNGRTVFIEENRYYAAYFEEIHPEIDVFDVQYTTKAHEAGELVTAAKEAAGNECRPVQNL 202
Query: 186 XXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXXXXXXXX 245
C+L L LP ++V+WD+I VD P G E PGRM +I+
Sbjct: 203 LFSDCKLGLNDLPNHVYDVDWDVIFVDGPRGDAHEGPGRMSSIFTAAVLARSKKGGTPKT 262
Query: 246 EVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPSHRDKDGTPFC 294
VFVHD R VE FLC LVE + +V+ DK+ T FC
Sbjct: 263 HVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHYVL-DKMDKNSTKFC 310
>AT2G15440.1 | chr2:6743792-6744781 REVERSE LENGTH=330
Length = 329
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 14/231 (6%)
Query: 73 VAQAMVHYATANVTPQQTAA---EIGVSLRVLQLRAP-CNFLVFGLGLDSAMWAALNHGG 128
V A++HY ++ +P T+ E+ ++ P CN L+FGL +S +W ++N G
Sbjct: 78 VLAALLHYTSS--SPPNTSMSFLELSTISNIIHSHGPACNLLIFGLTHESLLWRSINFQG 135
Query: 129 RTVFLEEDASWIASVKAGHPGLESYHVAYDTRVTDADELIA-LRHEPACTSQPDLXXXXX 187
RTVF++E ++ + +PG+E+Y V Y T+V+ A +L+ + P C +L
Sbjct: 136 RTVFVDESPYSVSKFEQSNPGVEAYEVVYSTKVSQAKKLLGYYKTRPECRPVQNL---LF 192
Query: 188 XSCRLALRGLPPVFHEVEWDLIMVDAPTGWTPESPGRMGAIYXXXXXXXXXX--XXXXXX 245
C+L + LP +E++WD+I++D P G+ +SPGRM I+
Sbjct: 193 SDCKLGINDLPNFVYEIDWDVILIDGPRGYASDSPGRMAPIFTSAVLAKSKDFGTKTKKT 252
Query: 246 EVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRRFVIPS--HRDKDGTPFC 294
+V VH+ R +E +S+ FLC+ L+E VG + FV+ + R+ G FC
Sbjct: 253 DVLVHEFGRKIERVYSEEFLCEENLIEVVGDLGHFVVAAAEERESYGDGFC 303
>AT4G24910.1 | chr4:12817954-12818901 REVERSE LENGTH=316
Length = 315
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 104 RAPCNFLVFGLGLDSAMWAALNHGGRTVFLEEDASWIASVKA--GHPGLESYHVAY-DTR 160
R+PCN LVFG M +++N G TV LE++ + I KA Y + Y
Sbjct: 116 RSPCNILVFGFAPQYLMLSSINTRGITVILEDEPAKIMIPKAEVNPNNTRIYSLKYHQME 175
Query: 161 VTDADELIA-LRHEPACTSQPDLXXXXXXSCRLALRGLPPVFHEVEWDLIMVDAPTGWTP 219
V +A L+ R PAC + C+L LR LP H +WD+I+VD P G
Sbjct: 176 VRNAYNLLQHARANPACAPNMNNQHQGSSDCKLELRDLPQQVHNTKWDVIVVDGPRGDDL 235
Query: 220 ESPGRMGAIYXXXXXXXXXXXXXXXXEVFVHDVDRHVEDTFSKAFLCDGYLVEQVGRIRR 279
E+PGRMG+IY +VFVHDV R E S FLC LV G +
Sbjct: 236 ETPGRMGSIY-TAAVLARKGSSNSTTDVFVHDVHRTAEKWLSWEFLCQENLVSAKGTFWK 294
Query: 280 FVIPSHRDKDGTPFC 294
F I R + + FC
Sbjct: 295 FRI--KRQSNASRFC 307
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,999,490
Number of extensions: 164003
Number of successful extensions: 267
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 10
Length of query: 295
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 197
Effective length of database: 8,419,801
Effective search space: 1658700797
Effective search space used: 1658700797
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 111 (47.4 bits)