Os12g0197500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Region of unknown function, putative Zinc finger, XS and XH domain containing protein.
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Os12g0197500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Region of unknown function, putative Zinc finger, XS and XH domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.92 | 0.381 | 10.1 | -1.63 | 0.287 | 1.45 | -0.703 | 0.16 | -0.412 | 22.2 | 9.007 | 12127 | -- | -- |
| 65.94 | 0.378 | 10.1 | -1.66 | 0.284 | 1.43 | -0.705 | -- | -0.422 | 22.2 | 10.14 | 12179 | -- | -- |
| 67.76 | 0.383 | 10.1 | -1.55 | 0.308 | 1.46 | -- | 0.234 | -0.38 | 22.5 | 9.65 | 11633 | -- | -- |
| 67.81 | 0.384 | 10.1 | -1.59 | 0.313 | 1.43 | -- | -- | -0.387 | 22.5 | 10.6 | 11634 | -- | -- |
| 72.25 | 0.396 | 10.1 | -1.79 | -- | 1.56 | -- | 0.0918 | -0.534 | -- | 11.26 | 15238 | -- | -- |
| 99.58 | 0.468 | 9.97 | -0.694 | 0.323 | -- | -0.603 | -- | 0.0912 | 22.5 | -- | -- | -- | -- |
| 101 | 0.471 | 9.97 | -0.671 | 0.325 | -- | -- | -- | 0.092 | 22.9 | -- | -- | -- | -- |
| 72.24 | 0.396 | 10.1 | -1.81 | -- | 1.54 | -- | -- | -0.539 | -- | 10.4 | 15243 | -- | -- |
| 95.91 | 0.456 | 10 | -- | 0.273 | 0.653 | -- | -- | -0.0414 | 22.4 | 27.77 | 9409 | -- | -- |
| 107.57 | 0.485 | 9.96 | -0.664 | -- | -- | -- | -- | 0.0942 | -- | -- | -- | -- | -- |
| 112.87 | 0.497 | 9.95 | -- | 0.32 | -- | -- | -- | 0.167 | 22.8 | -- | -- | -- | -- |
| 100.29 | 0.466 | 10 | -- | -- | 0.687 | -- | -- | -0.0572 | -- | 27.44 | 9456 | -- | -- |
| 119.21 | 0.51 | 9.95 | -- | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.86 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 6 | 60.72 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 8 | 60.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 10 | 60.79 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 13 | 61.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 14 | 61.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 16 | 61.14 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 18 | 61.27 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 21 | 61.32 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 30 | 61.60 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 31 | 61.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 37 | 61.76 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 38 | 61.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 60 | 61.94 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 67 | 61.96 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 72 | 62.02 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 138 | 62.55 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 153 | 62.62 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 188 | 62.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 201 | 62.86 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 237 | 63.06 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 278 | 63.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 279 | 63.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 280 | 63.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 295 | 63.31 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 363 | 63.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 370 | 63.61 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 401 | 63.72 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 402 | 63.72 | wind | 9.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 405 | 63.72 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 432 | 63.80 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 440 | 63.83 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 474 | 63.97 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 498 | 64.06 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 502 | 64.07 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 521 | 64.13 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 536 | 64.17 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 542 | 64.18 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 547 | 64.21 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 548 | 64.21 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 561 | 64.24 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 563 | 64.24 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 581 | 64.29 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 586 | 64.30 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 591 | 64.32 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 593 | 64.32 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 597 | 64.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 604 | 64.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 675 | 64.48 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 695 | 64.54 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 705 | 64.55 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 753 | 64.66 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 792 | 64.74 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 799 | 64.75 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 812 | 64.78 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 902 | 64.93 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 925 | 64.97 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 938 | 64.99 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 944 | 65.01 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 949 | 65.02 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 962 | 65.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 963 | 65.04 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 984 | 65.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 5 |