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Os12g0183100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Branched chain alpha-keto acid dehydrogenase E1-alpha subunit (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0233) R2 : 0.633
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.53 (0.0554) R2dC : 0.614 R2C : 0.61
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.231 (0.049) R2dN8 : 0.023 R2N8 : 0.0184
σ : 0.439
deviance : 88.16
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_____
C
peak time of C : 23.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
59.72 0.363 12.3 -0.36 1.49 0.773 -0.656 -2.06 -0.0687 23.7 7.206 7033 -- --
63.42 0.371 12.2 0.093 1.52 0.889 -0.603 -- 0.0455 23.7 9.976 7130 -- --
61.49 0.365 12.3 -0.343 1.49 0.774 -- -2.19 -0.0556 23.8 5.863 6592 -- --
65.42 0.377 12.2 0.112 1.49 0.915 -- -- 0.0576 23.7 10.63 7019 -- --
166.57 0.601 12.3 -0.398 -- 1.83 -- -2.79 -0.113 -- -9.414 893 -- --
77.42 0.412 12.2 0.552 1.52 -- -0.664 -- 0.292 23.8 -- -- -- --
79.33 0.417 12.2 0.579 1.52 -- -- -- 0.295 23.8 -- -- -- --
173.77 0.614 12.2 0.134 -- 1.79 -- -- 0.0281 -- -2.073 894 -- --
65.7 0.378 12.2 -- 1.48 0.977 -- -- 0.0335 23.7 10.3 7000 -- --
225.05 0.701 12.2 0.624 -- -- -- -- 0.314 -- -- -- -- --
88.16 0.439 12.2 -- 1.53 -- -- -- 0.231 23.8 -- -- -- --
174.18 0.615 12.2 -- -- 1.85 -- -- 0.00616 -- 12.03 897 -- --
235.31 0.716 12.2 -- -- -- -- -- 0.245 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.60 temperature 15 270 > th dose dependent rect. 15 18
2 53.83 temperature 10 270 > th dose dependent rect. 16 16
19 56.55 radiation 30 14400 < th dose dependent rect. 22 7
27 57.10 radiation 30 90 < th dose dependent rect. 7 14
37 57.62 radiation 10 90 < th dose independent rect. 7 14
49 58.09 radiation 30 270 < th dose independent rect. 2 17
51 58.17 radiation 10 14400 > th dose independent rect. 5 1
65 58.19 temperature 15 270 > th dose dependent rect. 15 6
68 58.26 humidity 80 43200 > th dose independent rect. 21 2
77 58.48 radiation 20 14400 > th dose dependent rect. 17 14
78 58.50 humidity 80 43200 < th dose independent rect. 21 2
79 58.50 radiation 20 14400 > th dose dependent rect. 6 1
111 58.89 humidity 80 43200 < th dose dependent rect. 21 1
120 59.03 radiation 20 10 < th dose dependent rect. 7 15
123 59.09 radiation 10 4320 < th dose independent rect. 22 7
129 59.16 wind 3 43200 < th dose independent rect. 20 2
132 59.18 radiation 40 270 < th dose dependent rect. 3 16
136 59.20 radiation 10 10 < th dose independent rect. 7 15
143 59.26 temperature 15 270 > th dose dependent rect. 16 3
146 59.31 temperature 20 270 > th dose independent rect. 15 5
152 59.38 humidity 80 43200 > th dose independent rect. 20 7
160 59.46 wind 3 43200 > th dose independent rect. 20 2
174 59.54 temperature 20 270 > th dose independent rect. 14 7
183 59.58 humidity 70 43200 < th dose dependent rect. 20 15
192 59.65 wind 3 43200 < th dose independent rect. 9 1
193 59.66 wind 3 43200 > th dose independent rect. 9 1
197 59.68 temperature 10 43200 > th dose independent rect. 10 7
199 59.69 temperature 30 4320 < th dose dependent rect. 6 1
201 59.70 temperature 10 4320 > th dose dependent rect. 6 1
207 59.72 temperature 10 1440 > th dose dependent rect. 18 2
210 59.72 wind 9 43200 > th dose dependent rect. 13 19
212 59.73 wind 3 43200 < th dose dependent rect. 9 1
215 59.74 wind 1 43200 < th dose dependent rect. 24 2
227 59.80 humidity 60 43200 > th dose independent rect. 19 17
231 59.80 wind 3 43200 > th dose dependent rect. 11 20
233 59.81 wind 3 43200 > th dose dependent rect. 9 20
235 59.81 wind 3 43200 > th dose dependent rect. 9 22
236 59.82 wind 3 43200 > th dose independent rect. 8 7
237 59.82 wind 5 43200 > th dose independent rect. 14 16
239 59.82 wind 5 43200 < th dose independent rect. 13 18
251 59.83 wind 1 43200 > th dose dependent rect. 6 18
253 59.83 wind 3 43200 > th dose dependent rect. 6 21
257 59.84 wind 5 43200 < th dose independent rect. 14 15
263 59.84 wind 3 43200 > th dose dependent rect. 19 22
268 59.85 wind 1 43200 > th dose dependent rect. 8 7
269 59.85 wind 5 43200 < th dose dependent rect. 8 7
270 59.85 wind 1 43200 > th dose dependent rect. 8 16
300 59.87 wind 1 43200 > th dose dependent rect. 6 9
329 59.89 wind 9 43200 < th dose dependent rect. 6 18
341 59.90 wind 3 43200 < th dose independent rect. 8 7
351 59.90 wind 3 43200 > th dose dependent rect. 23 18
354 59.90 wind 3 43200 > th dose dependent rect. 2 23
364 59.91 wind 9 43200 < th dose dependent rect. 8 17
378 59.92 wind 3 43200 > th dose dependent no NA NA
390 59.92 wind 3 43200 > th dose dependent rect. 22 23
396 59.93 temperature 30 1440 < th dose dependent rect. 19 1
402 59.93 wind 9 43200 < th dose dependent rect. 6 9
416 59.94 wind 3 43200 > th dose independent rect. 9 5
420 59.94 wind 3 43200 < th dose dependent rect. 8 4
421 59.94 wind 9 43200 < th dose dependent rect. 8 7
434 59.95 radiation 30 90 < th dose dependent sin 22 NA
452 59.96 wind 3 43200 > th dose dependent rect. 2 15
486 59.98 wind 3 43200 > th dose dependent sin 15 NA
508 59.99 wind 5 43200 < th dose dependent rect. 19 6
525 60.00 wind 1 43200 > th dose dependent rect. 9 1
541 60.00 wind 3 43200 > th dose dependent rect. 16 23
605 60.04 wind 9 43200 < th dose dependent rect. 9 1
616 60.05 wind 5 43200 < th dose independent sin 15 NA
619 60.05 wind 9 43200 > th dose independent rect. 13 20
621 60.05 wind 1 43200 > th dose dependent sin 0 NA
624 60.05 temperature 10 43200 > th dose dependent rect. 9 1
644 60.06 radiation 10 90 < th dose independent sin 22 NA
648 60.06 wind 9 43200 < th dose independent rect. 13 21
651 60.06 temperature 30 43200 < th dose dependent rect. 9 1
697 60.08 wind 5 43200 < th dose independent rect. 22 22
778 60.10 wind 9 43200 < th dose dependent rect. 19 22
780 60.11 humidity 60 43200 > th dose independent sin 9 NA
805 60.12 wind 5 43200 > th dose independent sin 15 NA
807 60.12 temperature 20 10 > th dose independent rect. 16 6
815 60.12 wind 9 43200 < th dose independent rect. 18 22
818 60.12 wind 9 43200 < th dose dependent sin 0 NA
851 60.13 humidity 60 43200 < th dose independent rect. 19 17
855 60.13 wind 5 43200 > th dose independent rect. 22 22
860 60.13 radiation 10 14400 < th dose dependent rect. 2 3
897 60.14 wind 5 43200 < th dose independent rect. 22 19
902 60.14 temperature 10 43200 > th dose dependent rect. 12 1
910 60.14 wind 1 43200 > th dose dependent rect. 19 6
944 60.15 wind 5 43200 < th dose independent rect. 6 21
945 60.15 wind 9 43200 > th dose independent rect. 18 22