Os12g0175500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutaredoxin-like protein.
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Os12g0175500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutaredoxin-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.65 | 0.334 | 14.5 | -0.394 | 1.99 | 1.89 | 0.216 | 0.746 | -0.515 | 21 | 8.53 | 231 | 7.03 | 7.97 |
| 51.51 | 0.334 | 14.5 | -0.421 | 1.99 | 1.94 | -0.0329 | -- | -0.525 | 21 | 9.345 | 231 | 7.03 | 7.95 |
| 50.74 | 0.332 | 14.5 | -0.404 | 2.01 | 1.92 | -- | 0.638 | -0.512 | 21 | 8.416 | 233 | 7.05 | 7.9 |
| 51.44 | 0.334 | 14.5 | -0.407 | 2 | 1.92 | -- | -- | -0.516 | 21 | 8.529 | 235 | 7.02 | 7.88 |
| 76.51 | 0.407 | 14.5 | -0.498 | -- | 2.24 | -- | 0.562 | -0.602 | -- | 4.247 | 841 | 7.21 | 8.18 |
| 85.96 | 0.435 | 14.5 | -0.285 | 1.85 | -- | 0.015 | -- | -0.495 | 18 | -- | -- | -- | -- |
| 85.96 | 0.434 | 14.5 | -0.285 | 1.85 | -- | -- | -- | -0.495 | 18 | -- | -- | -- | -- |
| 63.53 | 0.371 | 14.5 | -0.428 | -- | 2.22 | -- | -- | -0.499 | -- | -2.97 | 980 | 6.85 | 6.58 |
| 55.63 | 0.347 | 14.5 | -- | 1.98 | 1.82 | -- | -- | -0.471 | 20.9 | 7.641 | 231 | 7.08 | 7.85 |
| 263.68 | 0.759 | 14.5 | -0.339 | -- | -- | -- | -- | -0.537 | -- | -- | -- | -- | -- |
| 88.1 | 0.439 | 14.5 | -- | 1.86 | -- | -- | -- | -0.463 | 18 | -- | -- | -- | -- |
| 67.3 | 0.382 | 14.4 | -- | -- | 2.06 | -- | -- | -0.465 | -- | -15.02 | 945 | 7.02 | 6.82 |
| 266.7 | 0.762 | 14.5 | -- | -- | -- | -- | -- | -0.499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 11 | 56.12 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 9 |
| 52 | 58.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 70 | 59.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 72 | 60.30 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 81 | 60.65 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 82 | 60.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 89 | 60.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 90 | 60.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 92 | 60.87 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 94 | 60.92 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 96 | 61.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 97 | 61.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 98 | 61.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 102 | 61.13 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 105 | 61.27 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 20 | 17 |
| 106 | 61.34 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 107 | 61.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 108 | 61.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 115 | 61.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 116 | 61.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 117 | 61.53 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 118 | 61.54 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 125 | 61.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 128 | 61.83 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 139 | 62.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 141 | 62.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 144 | 62.14 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 159 | 62.27 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 173 | 62.41 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 175 | 62.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 183 | 62.48 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 189 | 62.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 190 | 62.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 199 | 62.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 201 | 62.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 202 | 62.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 203 | 62.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 204 | 62.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 205 | 62.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 210 | 62.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 211 | 62.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 212 | 62.70 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 219 | 62.71 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 220 | 62.72 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 223 | 62.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 225 | 62.73 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 226 | 62.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 228 | 62.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 229 | 62.73 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 230 | 62.73 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 232 | 62.73 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 244 | 62.88 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 249 | 62.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 18 |
| 259 | 63.16 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 261 | 63.16 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 263 | 63.17 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 265 | 63.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 16 |
| 267 | 63.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 293 | 63.40 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 311 | 63.48 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 337 | 63.66 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 339 | 63.68 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 362 | 63.76 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 366 | 63.80 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 367 | 63.81 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 14 |
| 385 | 63.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 399 | 63.98 | radiation | 1.0 | 10 | > th | dose independent | rect. | 8 | 9 |
| 405 | 64.01 | radiation | 1.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 419 | 64.08 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 435 | 64.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 461 | 64.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 16 |
| 480 | 64.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 604 | 64.70 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 657 | 64.87 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 665 | 64.91 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 668 | 64.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 787 | 65.22 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 794 | 65.24 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 10 |
| 799 | 65.27 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 831 | 65.35 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 858 | 65.39 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 896 | 65.47 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 906 | 65.49 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 955 | 65.58 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 985 | 65.66 | humidity | 50.0 | 10 | > th | dose independent | rect. | 8 | 9 |
| 1000 | 65.70 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 4 |