Os12g0172500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os12g0172500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.65 | 0.16 | 12 | -0.258 | 0.329 | -0.435 | -0.175 | -0.168 | 0.0953 | 0.649 | 21.28 | 19 | -- | -- |
| 11.67 | 0.16 | 12 | -0.268 | 0.327 | -0.394 | -0.206 | -- | 0.094 | 0.635 | 21.28 | 19 | -- | -- |
| 11.76 | 0.161 | 12 | -0.242 | 0.334 | -0.449 | -- | -0.293 | 0.0972 | 0.654 | 21.4 | 19 | -- | -- |
| 11.84 | 0.161 | 12 | -0.259 | 0.328 | -0.386 | -- | -- | 0.0949 | 0.631 | 21.4 | 10 | -- | -- |
| 16 | 0.186 | 12 | -0.298 | -- | -0.4 | -- | 0.147 | 0.0601 | -- | 22.78 | 904 | -- | -- |
| 13.04 | 0.169 | 12 | -0.2 | 0.287 | -- | -0.185 | -- | 0.129 | 0.586 | -- | -- | -- | -- |
| 13.18 | 0.17 | 12 | -0.193 | 0.288 | -- | -- | -- | 0.13 | 0.573 | -- | -- | -- | -- |
| 16.01 | 0.186 | 12 | -0.298 | -- | -0.433 | -- | -- | 0.0708 | -- | 22.7 | 897 | -- | -- |
| 13.47 | 0.172 | 12 | -- | 0.312 | -0.266 | -- | -- | 0.132 | 0.577 | 21.4 | 10 | -- | -- |
| 18.38 | 0.2 | 12 | -0.183 | -- | -- | -- | -- | 0.135 | -- | -- | -- | -- | -- |
| 14.16 | 0.176 | 12 | -- | 0.285 | -- | -- | -- | 0.151 | 0.54 | -- | -- | -- | -- |
| 18.06 | 0.198 | 12 | -- | -- | -0.285 | -- | -- | 0.119 | -- | 22.9 | 878 | -- | -- |
| 19.26 | 0.205 | 12 | -- | -- | -- | -- | -- | 0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.30 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 2 | 11.33 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 8 | 11.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 10 | 11.35 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 11 | 11.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 8 |
| 13 | 11.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 15 | 11.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 16 | 11.37 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 18 | 11.37 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 8 |
| 20 | 11.38 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 23 | 11.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 24 | 11.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 30 | 11.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 43 | 11.42 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 53 | 11.43 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 65 | 11.45 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 68 | 11.45 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 95 | 11.48 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 21 |
| 96 | 11.48 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 98 | 11.49 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 110 | 11.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 111 | 11.50 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 113 | 11.50 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 115 | 11.50 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 116 | 11.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 119 | 11.51 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 126 | 11.51 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 130 | 11.51 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 18 | 15 |
| 135 | 11.52 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 137 | 11.52 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 139 | 11.52 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 149 | 11.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 156 | 11.53 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 169 | 11.54 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 205 | 11.56 | temperature | 20.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 211 | 11.57 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 212 | 11.57 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 213 | 11.57 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 225 | 11.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 248 | 11.58 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 249 | 11.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 255 | 11.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 14 |
| 267 | 11.59 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 21 |
| 269 | 11.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 303 | 11.61 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 310 | 11.61 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 317 | 11.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 333 | 11.62 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 346 | 11.62 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 375 | 11.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 379 | 11.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 389 | 11.64 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 391 | 11.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 417 | 11.65 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 424 | 11.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 445 | 11.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 447 | 11.66 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 463 | 11.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 484 | 11.67 | temperature | 20.0 | 10 | > th | dose independent | no | NA | NA |
| 492 | 11.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 496 | 11.67 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 536 | 11.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 537 | 11.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 544 | 11.68 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 22 | 8 |
| 547 | 11.68 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 12 |
| 569 | 11.68 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 570 | 11.68 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 582 | 11.69 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 585 | 11.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 590 | 11.69 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 592 | 11.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 595 | 11.69 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 601 | 11.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 605 | 11.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 608 | 11.69 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 21 |
| 612 | 11.69 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 628 | 11.69 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 638 | 11.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 639 | 11.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 22 |
| 669 | 11.70 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 22 |
| 670 | 11.70 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 675 | 11.70 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 688 | 11.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 700 | 11.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 718 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 742 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 744 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 745 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 746 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 748 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 749 | 11.71 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 779 | 11.72 | wind | 1.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 806 | 11.72 | temperature | 20.0 | 10 | < th | dose independent | rect. | 11 | 19 |
| 807 | 11.72 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 810 | 11.72 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 21 |
| 815 | 11.72 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 838 | 11.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 876 | 11.73 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 877 | 11.73 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 903 | 11.73 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 17 |
| 951 | 11.74 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 965 | 11.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 975 | 11.74 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 21 |
| 983 | 11.74 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 999 | 11.74 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 18 | 9 |