Os12g0170600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha-1,4-fucosyltransferase.
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Os12g0170600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha-1,4-fucosyltransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.66 | 0.317 | 10.1 | -0.106 | 0.222 | 0.686 | 0.356 | -0.459 | 0.104 | 22.6 | 20.61 | 1221 | -- | -- |
| 46.1 | 0.316 | 10.1 | -0.0242 | 0.223 | 0.756 | 0.296 | -- | 0.124 | 22.5 | 20.55 | 1233 | -- | -- |
| 46.14 | 0.316 | 10.1 | -0.105 | 0.224 | 0.705 | -- | -0.377 | 0.11 | 22.4 | 20.58 | 1233 | -- | -- |
| 46.45 | 0.317 | 10.1 | -0.0357 | 0.222 | 0.754 | -- | -- | 0.124 | 22.4 | 20.56 | 1233 | -- | -- |
| 48.79 | 0.325 | 10.1 | -0.0978 | -- | 0.711 | -- | -0.326 | 0.101 | -- | 20.7 | 1078 | -- | -- |
| 59.76 | 0.362 | 10 | 0.286 | 0.269 | -- | 0.271 | -- | 0.297 | 22.9 | -- | -- | -- | -- |
| 60.07 | 0.363 | 10 | 0.275 | 0.267 | -- | -- | -- | 0.296 | 22.9 | -- | -- | -- | -- |
| 49.02 | 0.326 | 10.1 | -0.0198 | -- | 0.748 | -- | -- | 0.123 | -- | 20.6 | 966 | -- | -- |
| 46.48 | 0.318 | 10.1 | -- | 0.222 | 0.743 | -- | -- | 0.128 | 22.4 | 20.5 | 1233 | -- | -- |
| 64.51 | 0.375 | 10 | 0.281 | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
| 62.05 | 0.368 | 10 | -- | 0.27 | -- | -- | -- | 0.265 | 23 | -- | -- | -- | -- |
| 49.01 | 0.326 | 10.1 | -- | -- | 0.737 | -- | -- | 0.132 | -- | 20.58 | 967 | -- | -- |
| 66.58 | 0.381 | 10 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 2 | 43.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 5 |
| 6 | 44.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 15 | 44.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 20 | 44.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 21 | 44.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 23 | 44.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 49 | 44.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 60 | 44.41 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 80 | 44.51 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 84 | 44.53 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 142 | 44.79 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 146 | 44.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 158 | 44.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 163 | 44.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 9 |
| 177 | 44.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 182 | 44.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 220 | 44.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 531 | 45.44 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 628 | 45.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 630 | 45.61 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 664 | 45.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 694 | 45.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 742 | 45.78 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 789 | 45.84 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 872 | 45.94 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 915 | 46.01 | radiation | 30 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 919 | 46.02 | radiation | 30 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 923 | 46.02 | radiation | 30 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 933 | 46.04 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 941 | 46.06 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 953 | 46.06 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |