Os12g0169700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ferripyochelin-binding protein-like.
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Os12g0169700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ferripyochelin-binding protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.3 | 0.184 | 11.8 | -0.701 | 0.31 | -0.424 | 0.167 | -0.266 | -0.338 | 7.65 | 70.81 | 1878 | -- | -- |
| 15.37 | 0.183 | 11.8 | -0.731 | 0.331 | -0.439 | 0.131 | -- | -0.349 | 7.78 | 70.07 | 1950 | -- | -- |
| 15.37 | 0.183 | 11.8 | -0.704 | 0.311 | -0.426 | -- | -0.206 | -0.34 | 7.65 | 70.5 | 1880 | -- | -- |
| 15.41 | 0.183 | 11.8 | -0.726 | 0.327 | -0.438 | -- | -- | -0.347 | 7.75 | 70 | 1936 | -- | -- |
| 18.55 | 0.201 | 11.8 | -0.675 | -- | -0.334 | -- | -0.387 | -0.349 | -- | 67.56 | 2942 | -- | -- |
| 18.28 | 0.2 | 11.8 | -0.75 | 0.224 | -- | 0.111 | -- | -0.289 | 8.38 | -- | -- | -- | -- |
| 18.32 | 0.2 | 11.8 | -0.746 | 0.224 | -- | -- | -- | -0.289 | 8.41 | -- | -- | -- | -- |
| 18.68 | 0.201 | 11.8 | -0.724 | -- | -0.382 | -- | -- | -0.368 | -- | 67.57 | 2924 | -- | -- |
| 28.88 | 0.25 | 11.8 | -- | 0.263 | -0.509 | -- | -- | -0.379 | 8.94 | 69.8 | 6738 | -- | -- |
| 21.1 | 0.215 | 11.8 | -0.745 | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
| 32.99 | 0.269 | 11.7 | -- | 0.221 | -- | -- | -- | -0.205 | 8.66 | -- | -- | -- | -- |
| 31.57 | 0.262 | 11.8 | -- | -- | -0.523 | -- | -- | -0.357 | -- | 81 | 2884 | -- | -- |
| 35.75 | 0.279 | 11.7 | -- | -- | -- | -- | -- | -0.204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.78 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 2 | 14.83 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 3 | 14.84 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 6 | 15.08 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 7 | 15.09 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 9 | 15.10 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 11 | 15.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 12 | 15.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 14 | 15.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 15 | 15.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 16 | 15.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 17 | 15.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 19 | 15.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 24 | 15.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 26 | 15.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 27 | 15.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 46 | 15.18 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 52 | 15.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 56 | 15.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 59 | 15.20 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 68 | 15.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 1 | 16 |
| 79 | 15.23 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 80 | 15.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 85 | 15.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 104 | 15.27 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 113 | 15.27 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 126 | 15.29 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 134 | 15.29 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 149 | 15.31 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 151 | 15.31 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 218 | 15.36 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 241 | 15.38 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 246 | 15.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 247 | 15.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 264 | 15.38 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 266 | 15.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 304 | 15.40 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 339 | 15.41 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 381 | 15.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 382 | 15.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 400 | 15.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 5 |
| 446 | 15.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 479 | 15.44 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 615 | 15.48 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 22 |
| 617 | 15.48 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 618 | 15.48 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 620 | 15.48 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 696 | 15.50 | humidity | 70.0 | 1440 | > th | dose dependent | no | NA | NA |
| 710 | 15.50 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 711 | 15.50 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 714 | 15.51 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 21 | NA |
| 716 | 15.51 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 21 | NA |
| 757 | 15.51 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 21 | NA |
| 832 | 15.52 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 833 | 15.53 | humidity | 80.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 839 | 15.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 912 | 15.53 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |