Os12g0164600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF793 family protein.
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Os12g0164600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF793 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.35 | 0.424 | 12.5 | 0.36 | 1.47 | 12.3 | 0.254 | -37.1 | 0.242 | 2.42 | 0.3313 | 83 | -- | -- |
| 94.81 | 0.457 | 12.4 | 0.606 | 1.45 | 0.506 | 0.174 | -- | 0.225 | 2.32 | 0.3313 | 83 | -- | -- |
| 81.58 | 0.421 | 12.5 | 0.357 | 1.47 | 12.2 | -- | -36.9 | 0.238 | 2.42 | 0.343 | 83 | -- | -- |
| 84.38 | 0.428 | 12.4 | 0.548 | 1.47 | 2.58 | -- | -- | 0.26 | 2.4 | 0.2583 | 86 | -- | -- |
| 206.95 | 0.67 | 12.5 | 0.389 | -- | 13.8 | -- | -42.6 | 0.278 | -- | -0.4965 | 52 | -- | -- |
| 95.06 | 0.457 | 12.4 | 0.613 | 1.45 | -- | 0.193 | -- | 0.224 | 2.33 | -- | -- | -- | -- |
| 95.2 | 0.457 | 12.4 | 0.607 | 1.45 | -- | -- | -- | 0.223 | 2.33 | -- | -- | -- | -- |
| 209.98 | 0.675 | 12.4 | 0.627 | -- | 2.72 | -- | -- | 0.268 | -- | 1.373 | 101 | -- | -- |
| 90.24 | 0.442 | 12.4 | -- | 1.49 | 3.09 | -- | -- | 0.161 | 2.49 | 1.246 | 135 | -- | -- |
| 220.12 | 0.693 | 12.4 | 0.668 | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
| 104.92 | 0.479 | 12.4 | -- | 1.46 | -- | -- | -- | 0.155 | 2.33 | -- | -- | -- | -- |
| 220.27 | 0.691 | 12.4 | -- | -- | 2.79 | -- | -- | 0.2 | -- | 1.274 | 101 | -- | -- |
| 231.91 | 0.711 | 12.4 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.21 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 3 |
| 3 | 77.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 16 | 2 |
| 14 | 79.61 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 10 | 8 |
| 20 | 79.65 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 39 | 80.53 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 15 | 13 |
| 61 | 80.98 | temperature | 25.0 | 30 | < th | dose independent | rect. | 16 | 4 |
| 80 | 81.10 | precipitation | 0.1 | 90 | < th | dose independent | sin | 22 | NA |
| 81 | 81.10 | precipitation | 0.1 | 90 | < th | dose dependent | sin | 22 | NA |
| 85 | 81.15 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 15 | 13 |
| 91 | 81.21 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 23 | NA |
| 96 | 81.23 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 107 | 81.29 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 148 | 81.53 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 2 | 19 |
| 152 | 81.54 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 17 |
| 171 | 81.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 3 |
| 192 | 81.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 216 | 81.60 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 22 | 22 |
| 226 | 81.63 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 243 | 81.67 | precipitation | 0.1 | 90 | > th | dose dependent | no | NA | NA |
| 271 | 81.71 | precipitation | 0.1 | 90 | > th | dose independent | sin | 22 | NA |
| 390 | 82.11 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 391 | 82.11 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 497 | 82.31 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 3 |
| 535 | 82.50 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 19 | 23 |
| 600 | 82.76 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 4 |
| 630 | 82.83 | precipitation | 0.1 | 10 | < th | dose independent | sin | 21 | NA |
| 633 | 82.83 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 21 | NA |
| 639 | 82.89 | precipitation | 0.1 | 10 | > th | dose independent | sin | 20 | NA |
| 645 | 82.89 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 20 | NA |
| 727 | 83.10 | precipitation | 0.1 | 90 | > th | dose independent | no | NA | NA |
| 728 | 83.10 | precipitation | 0.1 | 90 | < th | dose independent | no | NA | NA |
| 737 | 83.10 | precipitation | 0.1 | 90 | < th | dose dependent | no | NA | NA |
| 794 | 83.31 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 815 | 83.47 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 14 |
| 822 | 83.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 1 |
| 840 | 83.67 | temperature | 25.0 | 30 | < th | dose independent | rect. | 12 | 9 |
| 846 | 83.73 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 17 | 3 |
| 925 | 84.34 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 17 |
| 929 | 84.38 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 935 | 84.42 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 19 |
| 946 | 84.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 947 | 84.47 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 8 |
| 987 | 84.67 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 1 |