Os12g0162500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to BZIP-like protein.
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Os12g0162500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to BZIP-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.6 | 0.18 | 11.4 | 1.27 | 0.233 | 0.361 | 0.753 | -0.988 | 0.237 | 21 | 23.04 | 1307 | -- | -- |
| 15.39 | 0.183 | 11.5 | 1.19 | 0.243 | 0.58 | 0.725 | -- | 0.203 | 21.3 | 19.18 | 2423 | -- | -- |
| 16.05 | 0.187 | 11.4 | 1.27 | 0.264 | 0.298 | -- | -1.16 | 0.229 | 21.2 | 23.03 | 887 | -- | -- |
| 17.14 | 0.193 | 11.5 | 1.17 | 0.246 | 0.615 | -- | -- | 0.202 | 20.9 | 19.22 | 2390 | -- | -- |
| 19.55 | 0.206 | 11.4 | 1.24 | -- | 0.277 | -- | -1.17 | 0.228 | -- | 22.9 | 1175 | -- | -- |
| 18.63 | 0.202 | 11.5 | 0.997 | 0.229 | -- | 0.761 | -- | 0.13 | 21 | -- | -- | -- | -- |
| 20.58 | 0.212 | 11.5 | 0.972 | 0.231 | -- | -- | -- | 0.131 | 20.5 | -- | -- | -- | -- |
| 20.34 | 0.21 | 11.5 | 1.17 | -- | 0.621 | -- | -- | 0.198 | -- | 18.96 | 2648 | -- | -- |
| 30.35 | 0.257 | 11.5 | -- | 0.226 | -0.626 | -- | -- | -0.165 | 20.4 | 42.49 | 47520 | -- | -- |
| 23.58 | 0.227 | 11.5 | 0.971 | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
| 45.48 | 0.315 | 11.5 | -- | 0.228 | -- | -- | -- | 0.0223 | 20.8 | -- | -- | -- | -- |
| 33.19 | 0.268 | 11.5 | -- | -- | -0.628 | -- | -- | -0.167 | -- | 55.03 | 47520 | -- | -- |
| 48.45 | 0.325 | 11.5 | -- | -- | -- | -- | -- | 0.0206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.96 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 3 | 13.99 | humidity | 80 | 14400 | > th | dose dependent | rect. | 19 | 12 |
| 26 | 14.21 | humidity | 80 | 14400 | > th | dose dependent | sin | 10 | NA |
| 35 | 14.25 | radiation | 40 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 73 | 14.41 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 75 | 14.43 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 77 | 14.43 | temperature | 20 | 1440 | < th | dose dependent | rect. | 23 | 5 |
| 85 | 14.44 | temperature | 20 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 92 | 14.45 | humidity | 50 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 146 | 14.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 175 | 14.57 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 183 | 14.58 | temperature | 20 | 1440 | < th | dose dependent | sin | 10 | NA |
| 191 | 14.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 196 | 14.59 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 204 | 14.60 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 229 | 14.61 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 240 | 14.62 | radiation | 10 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 247 | 14.63 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 266 | 14.65 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 293 | 14.67 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 308 | 14.68 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 337 | 14.70 | radiation | 20 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 363 | 14.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 397 | 14.74 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 544 | 14.79 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 583 | 14.80 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 717 | 14.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 773 | 14.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 816 | 14.85 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 855 | 14.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 867 | 14.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 873 | 14.86 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 880 | 14.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 901 | 14.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 14 |
| 903 | 14.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 16 |
| 931 | 14.87 | wind | 9 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 932 | 14.87 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 937 | 14.87 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 938 | 14.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 8 |
| 939 | 14.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 8 |
| 945 | 14.87 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 12 |