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Os12g0161700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.98 (0.0223) R2 : 0.797
β1 : 2.68 (0.0816) R2dD : 0.499 R2D : 0.459
β2 : 1.58 (0.0577) R2dC : 0.333 R2C : 0.311
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.188 (0.0476) R2dN8 : 0.00935 R2N8 : -0.019
σ : 0.419
deviance : 80
__
_____
C
peak time of C : 17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.6 0.398 9.47 6.2 1.57 107 0.096 222 0.275 16.9 15 4220 -- --
77.07 0.412 7.98 2.72 1.58 1.23 0.0189 -- 0.2 16.9 15 4220 -- --
71.42 0.394 9.47 6.19 1.57 108 -- 223 0.278 16.9 15 4772 -- --
73.37 0.399 7.97 3 1.54 1.14 -- -- 0.257 16.9 16.5 3164 -- --
202.02 0.662 9.45 6.15 -- 108 -- 222 0.238 -- 15 4235 -- --
79.98 0.419 7.98 2.68 1.57 -- 0.0975 -- 0.188 17 -- -- -- --
80 0.419 7.98 2.68 1.58 -- -- -- 0.188 17 -- -- -- --
200.49 0.659 7.93 2.92 -- 1.14 -- -- 0.244 -- 17.62 2768 -- --
182.3 0.629 8.13 -- 1.41 -1.31 -- -- -0.411 16.4 12.69 17804 -- --
210.6 0.678 7.96 2.62 -- -- -- -- 0.148 -- -- -- -- --
268.78 0.767 8.05 -- 1.53 -- -- -- -0.11 17 -- -- -- --
270.36 0.766 8.14 -- -- -1.79 -- -- -0.629 -- 24.4 47520 -- --
391.49 0.924 8.03 -- -- -- -- -- -0.143 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.52 temperature 10 270 > th dose dependent rect. 6 19
2 67.03 radiation 1 4320 < th dose independent rect. 24 5
3 67.28 wind 9 14400 < th dose independent rect. 24 3
7 67.56 radiation 40 14400 < th dose dependent rect. 24 5
13 68.13 radiation 10 4320 < th dose dependent rect. 24 5
14 68.30 temperature 30 10 < th dose dependent rect. 4 19
29 69.20 temperature 20 270 > th dose independent rect. 6 19
38 69.46 temperature 15 1440 > th dose independent rect. 12 12
39 69.47 humidity 50 43200 > th dose independent rect. 24 4
45 69.59 radiation 20 14400 < th dose independent rect. 17 10
46 69.60 temperature 10 30 > th dose dependent rect. 6 22
48 69.64 temperature 25 90 < th dose independent rect. 3 19
50 69.65 temperature 20 4320 < th dose independent rect. 13 10
51 69.67 temperature 20 4320 < th dose independent rect. 15 8
53 69.67 temperature 20 4320 > th dose independent rect. 13 10
59 69.71 temperature 25 10 < th dose independent rect. 4 18
65 69.77 temperature 20 1440 < th dose dependent rect. 16 6
67 69.81 temperature 30 30 < th dose dependent rect. 2 21
68 69.83 temperature 10 10 > th dose dependent rect. 8 20
88 69.92 temperature 30 270 < th dose independent rect. 1 19
91 69.96 wind 1 30 > th dose independent rect. 23 12
98 70.00 humidity 60 43200 < th dose independent rect. 16 20
111 70.07 humidity 60 43200 > th dose independent rect. 16 19
127 70.14 temperature 20 4320 < th dose dependent rect. 21 1
137 70.21 humidity 90 14400 > th dose dependent rect. 10 1
140 70.23 humidity 70 43200 > th dose independent rect. 19 13
145 70.25 humidity 60 43200 < th dose independent sin 7 NA
153 70.27 humidity 70 43200 < th dose dependent rect. 7 5
160 70.28 temperature 25 1440 < th dose dependent rect. 17 1
163 70.29 radiation 10 43200 > th dose dependent rect. 5 1
185 70.33 radiation 30 43200 > th dose independent rect. 16 1
209 70.34 humidity 70 43200 < th dose dependent rect. 9 1
211 70.35 humidity 60 43200 > th dose independent sin 8 NA
214 70.35 humidity 60 43200 < th dose dependent sin 17 NA
218 70.35 humidity 70 43200 < th dose dependent rect. 18 18
222 70.37 humidity 60 43200 > th dose independent sin 10 NA
239 70.40 wind 7 14400 > th dose independent rect. 20 14
244 70.41 humidity 70 43200 < th dose independent rect. 19 13
245 70.41 wind 7 14400 > th dose independent rect. 18 16
260 70.44 wind 7 14400 < th dose independent rect. 20 14
263 70.44 humidity 60 43200 < th dose dependent rect. 12 7
265 70.44 wind 7 14400 > th dose dependent rect. 18 16
280 70.46 temperature 20 4320 > th dose independent sin 20 NA
282 70.46 wind 7 14400 > th dose independent rect. 20 12
308 70.48 humidity 60 43200 > th dose independent rect. 24 12
318 70.49 humidity 60 43200 > th dose independent rect. 2 10
333 70.50 humidity 60 43200 < th dose independent sin 11 NA
366 70.52 humidity 50 14400 > th dose independent rect. 3 6
372 70.52 humidity 60 43200 < th dose dependent rect. 14 21
375 70.53 wind 7 14400 < th dose independent rect. 20 12
398 70.55 wind 7 14400 > th dose independent sin 10 NA
400 70.55 humidity 60 43200 < th dose independent rect. 24 13
414 70.57 temperature 20 4320 < th dose independent sin 19 NA
424 70.58 radiation 20 14400 < th dose independent rect. 17 3
427 70.58 wind 7 14400 < th dose independent rect. 20 10
447 70.60 humidity 50 43200 > th dose independent rect. 15 1
489 70.63 wind 7 14400 > th dose independent rect. 21 2
496 70.63 temperature 15 270 > th dose independent rect. 24 23
503 70.64 humidity 70 43200 < th dose dependent rect. 19 1
504 70.64 temperature 15 720 > th dose dependent rect. 18 4
513 70.65 humidity 70 43200 < th dose dependent sin 9 NA
524 70.67 wind 7 14400 < th dose independent sin 10 NA
562 70.69 wind 7 14400 > th dose dependent rect. 20 14
569 70.70 wind 7 14400 > th dose dependent sin 10 NA
584 70.71 temperature 25 10 < th dose independent rect. 4 16
588 70.71 wind 5 14400 > th dose dependent rect. 21 3
599 70.72 humidity 70 43200 < th dose independent rect. 19 4
600 70.72 temperature 15 720 > th dose independent rect. 17 5
602 70.72 wind 9 14400 < th dose independent rect. 18 11
668 70.76 humidity 50 10 > th dose dependent rect. 4 19
713 70.78 humidity 60 43200 < th dose dependent no NA NA
751 70.80 humidity 70 43200 > th dose independent rect. 19 6
765 70.81 radiation 20 14400 < th dose independent rect. 17 1
766 70.81 atmosphere 1010 720 < th dose independent rect. 17 5
767 70.81 temperature 15 10 > th dose independent rect. 6 22
768 70.81 temperature 15 720 > th dose dependent rect. 19 2
769 70.81 humidity 90 14400 > th dose dependent rect. 10 3
770 70.81 wind 5 14400 > th dose dependent rect. 20 9
773 70.82 atmosphere 1010 720 < th dose independent rect. 18 3
774 70.82 humidity 50 43200 > th dose independent rect. 15 5
785 70.83 radiation 10 14400 < th dose dependent rect. 24 3
792 70.84 humidity 50 43200 > th dose independent rect. 15 12
795 70.84 humidity 70 43200 < th dose dependent rect. 11 1
803 70.85 humidity 50 43200 > th dose independent rect. 15 10
829 70.87 wind 7 14400 > th dose independent rect. 6 2
887 70.92 wind 5 14400 > th dose dependent rect. 21 7
892 70.93 temperature 30 720 < th dose independent rect. 11 1
893 70.93 wind 7 14400 < th dose independent rect. 21 2
917 70.95 humidity 90 14400 < th dose independent rect. 12 1
928 70.96 radiation 30 43200 < th dose independent rect. 7 1
945 70.98 humidity 50 43200 < th dose independent rect. 15 2
952 70.98 humidity 70 43200 < th dose dependent rect. 18 4
958 70.99 temperature 15 270 > th dose independent rect. 17 12
980 71.01 humidity 90 14400 < th dose independent rect. 5 2