Os12g0158400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os12g0158400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.52 | 0.553 | 9.78 | 0.238 | 2.42 | 1.5 | 1.01 | 0.877 | -0.0429 | 8.09 | 23 | 396 | -- | -- |
| 139.32 | 0.55 | 9.77 | 0.344 | 2.42 | 1.39 | 1.13 | -- | -0.023 | 8.09 | 23 | 388 | -- | -- |
| 141.31 | 0.554 | 9.79 | 0.215 | 2.41 | 1.59 | -- | 1.36 | -0.0558 | 8.05 | 22.85 | 411 | -- | -- |
| 143.14 | 0.557 | 9.77 | 0.364 | 2.42 | 1.35 | -- | -- | -0.0309 | 8.06 | 23 | 391 | -- | -- |
| 393.24 | 0.924 | 9.8 | 0.604 | -- | 2.26 | -- | -0.145 | 0.194 | -- | 29.86 | 526 | -- | -- |
| 160.42 | 0.594 | 9.8 | 0.0217 | 2.51 | -- | 1.09 | -- | -0.223 | 7.99 | -- | -- | -- | -- |
| 163.94 | 0.6 | 9.81 | 0.0512 | 2.51 | -- | -- | -- | -0.224 | 7.97 | -- | -- | -- | -- |
| 389.92 | 0.92 | 9.75 | 0.669 | -- | 2.59 | -- | -- | 0.292 | -- | 29.9 | 544 | -- | -- |
| 146.25 | 0.563 | 9.78 | -- | 2.45 | 1.2 | -- | -- | -0.0852 | 8.03 | 23 | 388 | -- | -- |
| 507.99 | 1.05 | 9.87 | 0.0766 | -- | -- | -- | -- | -0.192 | -- | -- | -- | -- | -- |
| 164.01 | 0.599 | 9.81 | -- | 2.51 | -- | -- | -- | -0.23 | 7.97 | -- | -- | -- | -- |
| 403.05 | 0.935 | 9.78 | -- | -- | 2.38 | -- | -- | 0.193 | -- | 30 | 537 | -- | -- |
| 508.15 | 1.05 | 9.87 | -- | -- | -- | -- | -- | -0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.33 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 3 | 124.83 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 4 | 124.86 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 8 | 125.00 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 2 |
| 21 | 125.35 | wind | 9 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 22 | 125.38 | wind | 1 | 14400 | > th | dose dependent | rect. | 21 | 16 |
| 26 | 125.41 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 27 | 125.45 | wind | 3 | 14400 | < th | dose independent | sin | 11 | NA |
| 73 | 125.90 | wind | 3 | 14400 | > th | dose independent | sin | 10 | NA |
| 75 | 125.91 | wind | 5 | 14400 | < th | dose dependent | sin | 9 | NA |
| 77 | 125.92 | wind | 1 | 14400 | > th | dose dependent | sin | 7 | NA |
| 93 | 126.01 | wind | 9 | 14400 | < th | dose dependent | sin | 7 | NA |
| 134 | 126.21 | wind | 3 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 173 | 126.43 | wind | 3 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 190 | 126.51 | wind | 1 | 14400 | > th | dose dependent | rect. | 19 | 11 |
| 214 | 126.59 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 279 | 126.86 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 323 | 127.03 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 577 | 127.94 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 583 | 127.96 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 648 | 128.19 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 801 | 128.79 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 811 | 128.81 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 890 | 129.04 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 901 | 129.08 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 957 | 129.32 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 961 | 129.34 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 8 |