Os12g0152700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid-binding ACT domain containing protein.
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Os12g0152700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid-binding ACT domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.3 | 0.365 | 14 | -0.365 | 0.739 | 0.672 | 0.155 | 2.6 | -0.373 | 20.5 | 1.633 | 5735 | -- | -- |
| 64.7 | 0.375 | 13.9 | 0.0583 | 0.736 | 0.257 | 0.187 | -- | -0.255 | 20.5 | 13.15 | 12970 | -- | -- |
| 60.33 | 0.362 | 14 | -0.364 | 0.743 | 0.668 | -- | 2.56 | -0.376 | 20.6 | 1.673 | 5716 | -- | -- |
| 64.68 | 0.375 | 13.9 | 0.038 | 0.733 | 0.258 | -- | -- | -0.267 | 20.4 | 13.29 | 13047 | -- | -- |
| 86.85 | 0.436 | 13.9 | 0.0595 | -- | 0.299 | -- | -0.122 | -0.352 | -- | 1.673 | 5716 | -- | -- |
| 67.63 | 0.386 | 13.9 | 0.0584 | 0.723 | -- | 0.0975 | -- | -0.35 | 20.3 | -- | -- | -- | -- |
| 67.66 | 0.385 | 13.9 | 0.0554 | 0.722 | -- | -- | -- | -0.35 | 20.3 | -- | -- | -- | -- |
| 86.02 | 0.434 | 13.9 | 0.0439 | -- | 0.322 | -- | -- | -0.346 | -- | 5.673 | 18879 | -- | -- |
| 64.68 | 0.375 | 13.9 | -- | 0.732 | 0.288 | -- | -- | -0.27 | 20.3 | 12.09 | 13124 | -- | -- |
| 96.63 | 0.459 | 13.9 | 0.051 | -- | -- | -- | -- | -0.358 | -- | -- | -- | -- | -- |
| 67.74 | 0.385 | 13.9 | -- | 0.722 | -- | -- | -- | -0.356 | 20.3 | -- | -- | -- | -- |
| 86.07 | 0.434 | 13.9 | -- | -- | 0.322 | -- | -- | -0.351 | -- | 5.673 | 18879 | -- | -- |
| 96.7 | 0.459 | 13.9 | -- | -- | -- | -- | -- | -0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.77 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 4 | 56.23 | temperature | 25 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 5 | 56.25 | temperature | 25 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 8 | 56.33 | temperature | 25 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 12 | 56.40 | temperature | 25 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 27 | 56.47 | temperature | 15 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 37 | 56.50 | temperature | 30 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 43 | 56.52 | temperature | 25 | 14400 | < th | dose dependent | sin | 3 | NA |
| 70 | 56.61 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 138 | 56.72 | temperature | 25 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 228 | 56.82 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 275 | 56.86 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 307 | 56.88 | temperature | 25 | 14400 | < th | dose dependent | no | NA | NA |
| 321 | 56.88 | temperature | 25 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 381 | 56.93 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 501 | 57.00 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 554 | 57.03 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 563 | 57.04 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 597 | 57.06 | temperature | 10 | 14400 | > th | dose dependent | sin | 4 | NA |
| 630 | 57.07 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 687 | 57.10 | temperature | 15 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 712 | 57.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 718 | 57.11 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 735 | 57.12 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 783 | 57.15 | temperature | 20 | 14400 | < th | dose independent | sin | 23 | NA |
| 810 | 57.16 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 811 | 57.16 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 828 | 57.17 | temperature | 15 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 884 | 57.19 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 905 | 57.20 | temperature | 20 | 14400 | > th | dose independent | sin | 0 | NA |