Os12g0146500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF668 family protein.
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Os12g0146500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF668 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 294.4 | 0.806 | 5.77 | 0.673 | 3.48 | 1.69 | -0.278 | 0.704 | -0.178 | 7.73 | 25.8 | 5571 | -- | -- |
| 294.71 | 0.8 | 5.79 | 0.578 | 3.5 | 1.76 | -0.282 | -- | -0.178 | 7.74 | 26 | 5470 | -- | -- |
| 294.55 | 0.799 | 5.76 | 0.664 | 3.49 | 1.71 | -- | 0.683 | -0.163 | 7.75 | 25.9 | 5516 | -- | -- |
| 294.69 | 0.8 | 5.79 | 0.489 | 3.49 | 1.76 | -- | -- | -0.196 | 7.74 | 25.99 | 5517 | -- | -- |
| 937.25 | 1.43 | 5.85 | 0.711 | -- | 1.68 | -- | 0.401 | -0.0775 | -- | 27.09 | 5729 | -- | -- |
| 409.15 | 0.948 | 5.77 | 1.12 | 3.5 | -- | -0.353 | -- | -0.0991 | 7.56 | -- | -- | -- | -- |
| 409.5 | 0.948 | 5.76 | 1.11 | 3.5 | -- | -- | -- | -0.0984 | 7.56 | -- | -- | -- | -- |
| 936.77 | 1.43 | 5.86 | 0.565 | -- | 1.71 | -- | -- | -0.105 | -- | 27.17 | 5730 | -- | -- |
| 300.22 | 0.807 | 5.8 | -- | 3.48 | 1.89 | -- | -- | -0.283 | 7.71 | 25.42 | 5586 | -- | -- |
| 1067.29 | 1.53 | 5.85 | 1.16 | -- | -- | -- | -- | -0.0446 | -- | -- | -- | -- | -- |
| 441.99 | 0.983 | 5.79 | -- | 3.51 | -- | -- | -- | -0.222 | 7.54 | -- | -- | -- | -- |
| 943.9 | 1.43 | 5.89 | -- | -- | 1.88 | -- | -- | -0.225 | -- | 26.44 | 5732 | -- | -- |
| 1102.86 | 1.55 | 5.88 | -- | -- | -- | -- | -- | -0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 293.47 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 2 | 294.33 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 3 | 295.08 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 4 | 296.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 8 | 296.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 14 |
| 11 | 296.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 19 | 296.63 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 37 | 296.79 | temperature | 30 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 71 | 297.00 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 91 | 297.17 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 93 | 297.20 | temperature | 30 | 14400 | < th | dose independent | sin | 23 | NA |
| 96 | 297.23 | temperature | 30 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 98 | 297.24 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 99 | 297.26 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 103 | 297.32 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 105 | 297.33 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 15 |
| 111 | 297.34 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 118 | 297.34 | temperature | 30 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 136 | 297.37 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 21 |
| 144 | 297.38 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 223 | 297.45 | temperature | 30 | 14400 | > th | dose independent | sin | 23 | NA |
| 288 | 297.65 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 400 | 297.70 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 408 | 297.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 17 |
| 410 | 297.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 414 | 297.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 443 | 297.91 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 595 | 298.62 | temperature | 25 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 600 | 298.68 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 671 | 298.90 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 705 | 298.95 | temperature | 30 | 14400 | > th | dose dependent | sin | 0 | NA |
| 780 | 299.15 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 783 | 299.17 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 877 | 299.19 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 914 | 299.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 917 | 299.52 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 926 | 299.61 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 6 |
| 948 | 299.63 | temperature | 25 | 14400 | > th | dose dependent | rect. | 4 | 8 |