Os12g0141900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0141900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.02 | 0.443 | 8.52 | -1.53 | 0.222 | -1.51 | -0.0978 | 0.244 | -0.156 | 4.82 | 22.66 | 307 | -- | -- |
| 89.06 | 0.44 | 8.51 | -1.51 | 0.225 | -1.57 | -0.0467 | -- | -0.15 | 4.74 | 22.54 | 299 | -- | -- |
| 89.04 | 0.439 | 8.52 | -1.52 | 0.221 | -1.52 | -- | 0.178 | -0.153 | 4.77 | 22.61 | 303 | -- | -- |
| 89.06 | 0.44 | 8.51 | -1.51 | 0.225 | -1.57 | -- | -- | -0.149 | 4.75 | 22.54 | 299 | -- | -- |
| 91.53 | 0.446 | 8.52 | -1.53 | -- | -1.44 | -- | 0.342 | -0.15 | -- | 22.55 | 327 | -- | -- |
| 114.65 | 0.502 | 8.47 | -1.16 | 0.104 | -- | 0.0175 | -- | 0.0486 | 5.74 | -- | -- | -- | -- |
| 114.65 | 0.501 | 8.47 | -1.16 | 0.104 | -- | -- | -- | 0.0485 | 5.74 | -- | -- | -- | -- |
| 91.63 | 0.446 | 8.51 | -1.49 | -- | -1.5 | -- | -- | -0.133 | -- | 22.47 | 315 | -- | -- |
| 140.66 | 0.552 | 8.46 | -- | 0.137 | -0.88 | -- | -- | 0.0906 | 2.76 | 22.69 | 45 | -- | -- |
| 115.22 | 0.502 | 8.47 | -1.16 | -- | -- | -- | -- | 0.051 | -- | -- | -- | -- | -- |
| 150.25 | 0.573 | 8.44 | -- | 0.087 | -- | -- | -- | 0.178 | 6.35 | -- | -- | -- | -- |
| 141.86 | 0.555 | 8.46 | -- | -- | -0.82 | -- | -- | 0.104 | -- | 22.5 | 37 | -- | -- |
| 150.64 | 0.573 | 8.44 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 5 | 90.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 7 | 90.25 | temperature | 25 | 1440 | < th | dose dependent | sin | 21 | NA |
| 17 | 90.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 67 | 90.67 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 87 | 90.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 9 |
| 172 | 91.22 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 177 | 91.24 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 310 | 91.76 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 312 | 91.78 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 382 | 92.01 | temperature | 20 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 405 | 92.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 429 | 92.18 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 466 | 92.28 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 471 | 92.30 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 497 | 92.37 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 522 | 92.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 529 | 92.49 | wind | 9 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 531 | 92.50 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 554 | 92.55 | humidity | 50 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 594 | 92.66 | temperature | 20 | 90 | < th | dose dependent | sin | 7 | NA |
| 708 | 93.01 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 12 |
| 729 | 93.08 | temperature | 10 | 10 | > th | dose dependent | sin | 6 | NA |
| 813 | 93.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 907 | 93.36 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 15 |