Os12g0135200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os12g0135200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.92 | 0.689 | 5.35 | -0.72 | 0.734 | -1.84 | -1.16 | -2.71 | -0.604 | 0.473 | 25.9 | 944 | -- | -- |
| 222.85 | 0.695 | 5.41 | -1.18 | 0.739 | -1.66 | -0.749 | -- | -0.717 | 0.588 | 27.36 | 939 | -- | -- |
| 219.78 | 0.69 | 5.35 | -0.739 | 0.826 | -1.85 | -- | -2.46 | -0.599 | 0.159 | 25.32 | 1147 | -- | -- |
| 224.6 | 0.698 | 5.4 | -1.19 | 0.736 | -1.67 | -- | -- | -0.717 | 0.826 | 26.95 | 902 | -- | -- |
| 250.04 | 0.736 | 5.37 | -0.921 | -- | -2.2 | -- | -1.91 | -0.709 | -- | 27.3 | 919 | -- | -- |
| 262.68 | 0.76 | 5.33 | -0.733 | 0.996 | -- | -0.695 | -- | -0.349 | 0.312 | -- | -- | -- | -- |
| 264.76 | 0.762 | 5.33 | -0.706 | 0.998 | -- | -- | -- | -0.346 | 0.317 | -- | -- | -- | -- |
| 254.49 | 0.743 | 5.41 | -1.29 | -- | -2.11 | -- | -- | -0.78 | -- | 28.05 | 916 | -- | -- |
| 256.72 | 0.746 | 5.35 | -- | 0.829 | -1.12 | -- | -- | -0.477 | 0.851 | 26.35 | 772 | -- | -- |
| 327.37 | 0.845 | 5.31 | -0.672 | -- | -- | -- | -- | -0.33 | -- | -- | -- | -- | -- |
| 277.89 | 0.78 | 5.31 | -- | 0.988 | -- | -- | -- | -0.267 | 0.279 | -- | -- | -- | -- |
| 293.11 | 0.797 | 5.35 | -- | -- | -1.59 | -- | -- | -0.54 | -- | 28.8 | 907 | -- | -- |
| 339.3 | 0.86 | 5.29 | -- | -- | -- | -- | -- | -0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.20 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 3 | 204.15 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 6 | 205.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 8 | 207.96 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 19 | 212.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 21 | 212.78 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 28 | 213.42 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 42 | 214.88 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 44 | 215.00 | temperature | 25 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 47 | 215.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 51 | 215.43 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 53 | 215.52 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 60 | 215.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 91 | 216.19 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 130 | 216.68 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 151 | 216.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 153 | 216.86 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 159 | 216.88 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 167 | 216.97 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 179 | 217.05 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 187 | 217.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 197 | 217.22 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 207 | 217.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 209 | 217.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 213 | 217.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 17 |
| 229 | 217.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 12 |
| 230 | 217.44 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 234 | 217.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 4 |
| 244 | 217.49 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 255 | 217.52 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 278 | 217.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 340 | 217.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 347 | 217.79 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 353 | 217.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 362 | 217.82 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 412 | 217.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 465 | 218.03 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 500 | 218.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 608 | 218.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 609 | 218.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 763 | 218.49 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 826 | 218.59 | temperature | 25 | 43200 | < th | dose independent | sin | 13 | NA |
| 849 | 218.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 854 | 218.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 11 | 7 |
| 893 | 218.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 959 | 218.81 | temperature | 25 | 43200 | > th | dose independent | sin | 13 | NA |
| 970 | 218.82 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 983 | 218.84 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |