Os12g0125300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mad3/BUB1 homology region 1 domain containing protein.
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Os12g0125300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mad3/BUB1 homology region 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.47 | 0.563 | 5.45 | -0.0352 | 0.164 | 0.988 | -0.116 | 3.97 | -0.31 | 23.9 | 20.8 | 1407 | -- | -- |
| 158.29 | 0.586 | 5.55 | -0.787 | 0.128 | 0.769 | 0.0233 | -- | -0.357 | 22.9 | 32.04 | 6476 | -- | -- |
| 143.51 | 0.558 | 5.45 | -0.0331 | 0.166 | 0.988 | -- | 3.95 | -0.31 | 23.5 | 20.8 | 1406 | -- | -- |
| 157.8 | 0.585 | 5.54 | -0.824 | 0.147 | 0.754 | -- | -- | -0.338 | 1.22 | 32 | 6474 | -- | -- |
| 145.23 | 0.561 | 5.45 | -0.0326 | -- | 1 | -- | 3.96 | -0.31 | -- | 20.84 | 1406 | -- | -- |
| 181.58 | 0.632 | 5.54 | -0.619 | 0.185 | -- | 0.0769 | -- | -0.349 | 23.4 | -- | -- | -- | -- |
| 181.6 | 0.631 | 5.54 | -0.622 | 0.185 | -- | -- | -- | -0.35 | 23.6 | -- | -- | -- | -- |
| 159.13 | 0.588 | 5.54 | -0.821 | -- | 0.761 | -- | -- | -0.336 | -- | 32.01 | 6477 | -- | -- |
| 175.41 | 0.617 | 5.54 | -- | 0.146 | 0.636 | -- | -- | -0.292 | 0.967 | 32.2 | 6456 | -- | -- |
| 183.75 | 0.633 | 5.54 | -0.617 | -- | -- | -- | -- | -0.348 | -- | -- | -- | -- | -- |
| 191.81 | 0.648 | 5.53 | -- | 0.178 | -- | -- | -- | -0.28 | 23.4 | -- | -- | -- | -- |
| 176.3 | 0.618 | 5.53 | -- | -- | 0.624 | -- | -- | -0.287 | -- | 32 | 6481 | -- | -- |
| 193.8 | 0.65 | 5.52 | -- | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 5 | 145.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 18 | 145.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 22 | 145.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 31 | 145.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 41 | 145.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 19 |
| 67 | 145.46 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 82 | 145.50 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 216 | 145.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 322 | 146.24 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 345 | 146.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 21 |
| 373 | 146.35 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 381 | 146.36 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 19 |
| 400 | 146.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 433 | 146.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 445 | 146.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 457 | 146.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 471 | 146.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 496 | 146.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 545 | 146.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 552 | 146.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 618 | 146.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 22 |
| 634 | 146.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 20 |
| 667 | 146.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 744 | 146.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 746 | 146.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 780 | 147.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 783 | 147.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 842 | 147.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 845 | 147.12 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 918 | 147.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 923 | 147.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 947 | 147.27 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 987 | 147.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 22 |