Os12g0124500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZF-HD homeobox protein Cys/His-rich dimerisation region domain containing protein.
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Os12g0124500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZF-HD homeobox protein Cys/His-rich dimerisation region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.55 | 0.459 | 10.5 | 1.3 | 1.3 | 0.634 | 1.98 | 0.715 | 1.07 | 21.1 | 27.34 | 1433 | -- | -- |
| 96.73 | 0.458 | 10.4 | 1.35 | 1.29 | 0.623 | 2.02 | -- | 1.07 | 21.1 | 27 | 1433 | -- | -- |
| 108.37 | 0.485 | 10.4 | 1.19 | 1.29 | 0.67 | -- | 0.949 | 1.09 | 20.9 | 24.59 | 1548 | -- | -- |
| 109.99 | 0.488 | 10.4 | 1.32 | 1.27 | 0.637 | -- | -- | 1.08 | 21 | 24.96 | 1445 | -- | -- |
| 149.35 | 0.572 | 10.4 | 1.21 | -- | 0.756 | -- | 1.05 | 0.946 | -- | 3.663 | 1555 | -- | -- |
| 112.66 | 0.498 | 10.5 | 1.28 | 1.28 | -- | 1.89 | -- | 0.93 | 21 | -- | -- | -- | -- |
| 124.91 | 0.523 | 10.5 | 1.21 | 1.27 | -- | -- | -- | 0.929 | 20.9 | -- | -- | -- | -- |
| 155.26 | 0.583 | 10.4 | 1.2 | -- | 0.781 | -- | -- | 0.948 | -- | 5.655 | 1557 | -- | -- |
| 137.75 | 0.547 | 10.5 | -- | 1.32 | 0.862 | -- | -- | 0.912 | 20.9 | 84.48 | 29626 | -- | -- |
| 217.73 | 0.689 | 10.4 | 1.22 | -- | -- | -- | -- | 0.921 | -- | -- | -- | -- | -- |
| 163.79 | 0.599 | 10.5 | -- | 1.27 | -- | -- | -- | 0.794 | 21 | -- | -- | -- | -- |
| 193.21 | 0.65 | 10.5 | -- | -- | 0.787 | -- | -- | 0.815 | -- | 5.655 | 1557 | -- | -- |
| 256.69 | 0.748 | 10.5 | -- | -- | -- | -- | -- | 0.786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 2 | 90.80 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 4 | 90.85 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 5 | 90.89 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 6 | 91.05 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 10 | 91.27 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 13 | 91.84 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 14 | 91.87 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 15 | 91.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 16 | 91.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 13 |
| 25 | 92.27 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 10 |
| 26 | 92.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 10 |
| 27 | 92.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 10 |
| 28 | 92.29 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 30 | 92.41 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 31 | 92.43 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 34 | 92.48 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 40 | 92.48 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 20 | 15 |
| 43 | 92.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 22 | 13 |
| 47 | 92.52 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 49 | 92.52 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 50 | 92.53 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 94 | 92.68 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 112 | 92.69 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 118 | 92.72 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 140 | 92.73 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 175 | 92.76 | temperature | 30.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 198 | 92.81 | temperature | 30.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 247 | 92.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 259 | 92.86 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 307 | 92.94 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |
| 472 | 93.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 7 |
| 488 | 93.00 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 498 | 93.00 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 524 | 93.03 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 547 | 93.04 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 662 | 93.11 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 21 |
| 686 | 93.13 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 698 | 93.14 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 14 |
| 719 | 93.16 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 822 | 93.19 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 921 | 93.20 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 12 |