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Os12g0123100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0181) R2 : 0.408
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.821 (0.0474) R2dC : 0.392 R2C : 0.379
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.157 (0.038) R2dN8 : 0.0286 R2N8 : 0.0159
σ : 0.341
deviance : 53.1
__
_____
C
peak time of C : 17.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.77 0.311 10.5 -0.929 0.819 0.0759 0.0038 -2.88 -0.0815 17.9 9.733 4497 -- --
50.11 0.332 10.4 -0.274 0.747 0.466 0.0434 -- 0.0709 18.5 9.733 4497 -- --
43.77 0.308 10.5 -0.929 0.819 0.0756 -- -2.89 -0.0814 17.9 9.746 4503 -- --
50.11 0.332 10.4 -0.275 0.748 0.467 -- -- 0.071 18.5 9.746 4503 -- --
76.05 0.408 10.4 -0.535 -- 0.831 -- -1.3 -0.0395 -- 11.08 6255 -- --
52.19 0.339 10.4 -0.183 0.817 -- 0.0777 -- 0.136 17.9 -- -- -- --
52.21 0.338 10.4 -0.184 0.818 -- -- -- 0.136 17.9 -- -- -- --
77.46 0.412 10.4 -0.356 -- 0.809 -- -- 0.0099 -- 12.3 13562 -- --
51.91 0.337 10.4 -- 0.769 0.334 -- -- 0.117 18.3 8.815 8844 -- --
86.88 0.436 10.4 -0.209 -- -- -- -- 0.118 -- -- -- -- --
53.1 0.341 10.4 -- 0.821 -- -- -- 0.157 17.9 -- -- -- --
80.6 0.42 10.4 -- -- 0.697 -- -- 0.062 -- 12.3 13562 -- --
88.02 0.438 10.4 -- -- -- -- -- 0.141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.66 temperature 10 90 > th dose dependent rect. 8 22
2 40.78 temperature 10 10 > th dose dependent rect. 9 21
4 41.03 temperature 10 90 > th dose dependent rect. 9 19
19 41.82 atmosphere 1010 30 < th dose independent rect. 9 21
38 42.46 temperature 15 90 > th dose independent rect. 8 22
41 42.60 atmosphere 1010 30 < th dose independent rect. 9 19
46 42.78 temperature 10 43200 > th dose independent rect. 10 6
47 42.78 humidity 60 43200 > th dose dependent rect. 19 4
50 42.82 humidity 60 43200 > th dose dependent rect. 18 6
54 42.87 humidity 60 43200 > th dose dependent rect. 20 2
55 42.88 wind 5 43200 > th dose independent rect. 8 2
56 42.88 wind 5 43200 < th dose independent rect. 8 2
74 43.00 wind 1 43200 > th dose independent rect. 13 13
75 43.00 wind 1 43200 < th dose independent rect. 13 13
79 43.01 humidity 60 43200 > th dose dependent rect. 17 8
82 43.04 temperature 20 90 > th dose independent rect. 9 19
103 43.14 wind 1 43200 < th dose dependent rect. 7 19
110 43.19 wind 5 43200 > th dose independent rect. 18 17
122 43.22 wind 7 43200 > th dose independent rect. 19 10
129 43.23 wind 5 43200 < th dose independent rect. 18 17
133 43.24 wind 7 43200 > th dose dependent rect. 19 10
134 43.24 wind 5 43200 > th dose dependent rect. 18 15
137 43.25 wind 7 43200 > th dose independent rect. 20 8
138 43.25 wind 7 43200 > th dose independent rect. 18 13
141 43.26 wind 7 43200 < th dose independent rect. 20 8
143 43.26 wind 7 43200 < th dose independent rect. 19 10
144 43.26 wind 7 43200 < th dose independent rect. 18 15
146 43.26 humidity 50 43200 > th dose dependent sin 15 NA
155 43.28 humidity 90 43200 < th dose dependent rect. 18 6
161 43.28 wind 1 43200 < th dose dependent rect. 9 17
162 43.28 humidity 50 43200 > th dose dependent rect. 18 20
166 43.29 temperature 15 30 > th dose dependent rect. 9 6
188 43.31 humidity 90 43200 < th dose dependent rect. 17 8
198 43.32 temperature 30 4320 < th dose dependent rect. 20 1
219 43.34 temperature 10 4320 > th dose dependent rect. 20 1
266 43.37 temperature 10 4320 > th dose dependent rect. 12 12
269 43.37 humidity 50 43200 > th dose dependent rect. 12 17
278 43.38 humidity 80 43200 > th dose independent rect. 14 20
279 43.38 humidity 80 43200 < th dose independent rect. 13 21
292 43.38 humidity 50 43200 > th dose dependent rect. 14 20
344 43.41 temperature 30 4320 < th dose dependent rect. 18 1
362 43.42 temperature 10 4320 > th dose dependent rect. 16 7
381 43.43 humidity 90 43200 < th dose dependent sin 15 NA
383 43.43 temperature 30 4320 < th dose dependent rect. 18 3
417 43.44 temperature 10 4320 > th dose dependent rect. 18 1
418 43.44 temperature 10 4320 > th dose dependent rect. 18 3
420 43.44 temperature 10 4320 > th dose dependent rect. 16 5
447 43.45 humidity 80 43200 < th dose independent rect. 19 20
453 43.45 temperature 30 4320 < th dose dependent rect. 17 6
478 43.46 temperature 10 4320 > th dose dependent sin 17 NA
481 43.46 radiation 1 90 > th dose dependent rect. 5 3
502 43.46 humidity 90 43200 < th dose dependent rect. 13 15
572 43.49 wind 5 43200 > th dose independent sin 10 NA
581 43.49 humidity 50 43200 > th dose dependent no NA NA
602 43.49 humidity 90 43200 < th dose dependent rect. 18 21
609 43.50 humidity 80 43200 > th dose independent rect. 19 20
629 43.50 radiation 1 10 > th dose dependent rect. 18 15
658 43.51 radiation 1 10 > th dose dependent rect. 5 4
685 43.51 radiation 1 10 > th dose dependent rect. 16 17
727 43.53 wind 5 43200 < th dose independent sin 10 NA
764 43.54 wind 5 43200 > th dose dependent sin 10 NA
886 43.57 temperature 20 4320 > th dose independent rect. 17 8
926 43.58 humidity 50 43200 < th dose dependent rect. 8 1
943 43.58 humidity 90 43200 < th dose dependent rect. 17 17