Os12g0121000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0121000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.7 | 0.508 | 8.54 | -0.597 | 2.21 | -1.05 | 0.433 | -1.29 | 0.0543 | 9.78 | 25.84 | 10 | -- | -- |
| 118.67 | 0.511 | 8.56 | -0.813 | 2.21 | -0.979 | 0.767 | -- | 0.00352 | 9.74 | 26.9 | 6 | -- | -- |
| 117.07 | 0.508 | 8.53 | -0.534 | 2.2 | -1.06 | -- | -1.56 | 0.0654 | 9.78 | 25.81 | 8 | -- | -- |
| 120.86 | 0.512 | 8.57 | -0.794 | 2.21 | -1 | -- | -- | -0.00402 | 9.71 | 26.95 | 11 | -- | -- |
| 383.33 | 0.912 | 8.64 | -0.735 | -- | -2.06 | -- | -1.81 | -0.135 | -- | 27.01 | 2 | -- | -- |
| 132.77 | 0.54 | 8.51 | -0.584 | 2.35 | -- | 0.779 | -- | 0.218 | 10.1 | -- | -- | -- | -- |
| 135.18 | 0.544 | 8.51 | -0.553 | 2.35 | -- | -- | -- | 0.219 | 10.1 | -- | -- | -- | -- |
| 387.96 | 0.917 | 8.67 | -1.04 | -- | -1.99 | -- | -- | -0.198 | -- | 27.8 | 2 | -- | -- |
| 135.68 | 0.545 | 8.53 | -- | 2.25 | -0.683 | -- | -- | 0.149 | 9.88 | 26.8 | 7 | -- | -- |
| 468.15 | 1.01 | 8.58 | -0.585 | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
| 143.24 | 0.56 | 8.5 | -- | 2.35 | -- | -- | -- | 0.281 | 10.1 | -- | -- | -- | -- |
| 414.63 | 0.948 | 8.63 | -- | -- | -1.7 | -- | -- | -0.0262 | -- | 28.02 | 2 | -- | -- |
| 477.19 | 1.02 | 8.56 | -- | -- | -- | -- | -- | 0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 5 | 105.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 13 | 106.38 | radiation | 10 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 18 | 106.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 19 | 107.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 7 |
| 20 | 107.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 44 | 108.60 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 47 | 108.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 50 | 108.95 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 63 | 109.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 100 | 110.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 117 | 110.73 | temperature | 20 | 10 | > th | dose dependent | sin | 8 | NA |
| 147 | 111.24 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 163 | 111.59 | radiation | 1 | 90 | < th | dose independent | rect. | 1 | 16 |
| 170 | 111.70 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 171 | 111.70 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 178 | 111.90 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 185 | 111.98 | atmosphere | 1010 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 189 | 112.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 214 | 112.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 14 |
| 215 | 112.15 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 223 | 112.19 | radiation | 10 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 237 | 112.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 269 | 112.48 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 281 | 112.55 | radiation | 1 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 292 | 112.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 299 | 112.62 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 19 |
| 335 | 112.78 | temperature | 30 | 10 | < th | dose dependent | sin | 7 | NA |
| 350 | 112.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 471 | 113.29 | atmosphere | 1010 | 43200 | < th | dose dependent | sin | 4 | NA |
| 510 | 113.37 | wind | 1 | 90 | > th | dose independent | rect. | 1 | 16 |
| 641 | 113.64 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 7 | NA |
| 648 | 113.65 | wind | 1 | 90 | > th | dose independent | rect. | 1 | 5 |
| 717 | 113.76 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 7 | NA |
| 718 | 113.76 | radiation | 1 | 90 | < th | dose independent | sin | 3 | NA |
| 891 | 114.01 | radiation | 1 | 90 | > th | dose independent | sin | 4 | NA |
| 903 | 114.02 | radiation | 1 | 270 | < th | dose independent | rect. | 22 | 20 |