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Os12g0112300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.81 (0.0141) R2 : 0.0372
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.124 (0.0296) R2dN8 : 0.0481 R2N8 : 0.0372
σ : 0.265
deviance : 32.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.28 0.25 9.8 0.268 0.0296 -0.474 -0.418 0.677 0.123 1.77 61.06 252 -- --
28.4 0.248 9.81 0.251 0.0318 -0.368 -0.467 -- 0.128 1.59 61 266 -- --
28.85 0.25 9.8 0.271 0.0418 -0.553 -- 1.14 0.118 23.7 59.93 199 -- --
29.16 0.252 9.81 0.27 0.048 -0.345 -- -- 0.128 22.1 62 288 -- --
28.93 0.251 9.8 0.284 -- -0.506 -- 1.04 0.124 -- 61.36 203 -- --
29.85 0.256 9.8 0.224 0.0679 -- -0.395 -- 0.147 1.65 -- -- -- --
30.45 0.258 9.8 0.236 0.0711 -- -- -- 0.149 2.59 -- -- -- --
29.31 0.252 9.81 0.267 -- -0.331 -- -- 0.13 -- 63.06 277 -- --
31.01 0.259 9.81 -- 0.0477 -0.275 -- -- 0.103 23 64 298 -- --
30.75 0.259 9.8 0.239 -- -- -- -- 0.151 -- -- -- -- --
31.92 0.264 9.81 -- 0.0757 -- -- -- 0.123 2.63 -- -- -- --
31.16 0.26 9.81 -- -- -0.283 -- -- 0.103 -- 64 276 -- --
32.26 0.265 9.81 -- -- -- -- -- 0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.55 atmosphere 1005 270 > th dose dependent rect. 23 7
5 25.98 atmosphere 1005 10 > th dose dependent rect. 24 9
17 26.60 atmosphere 1005 10 > th dose dependent rect. 24 7
18 26.61 temperature 25 270 > th dose independent rect. 23 8
22 26.72 atmosphere 1005 30 > th dose dependent rect. 12 11
31 26.87 temperature 25 270 > th dose dependent rect. 24 6
35 26.91 temperature 25 720 > th dose dependent rect. 21 5
40 26.96 temperature 25 720 > th dose independent rect. 21 5
47 26.99 temperature 25 1440 > th dose dependent rect. 24 1
62 27.07 atmosphere 1005 90 > th dose independent rect. 23 10
72 27.14 temperature 25 270 > th dose dependent rect. 23 8
74 27.15 temperature 25 720 > th dose dependent rect. 21 1
89 27.23 temperature 25 720 > th dose independent rect. 24 1
91 27.24 atmosphere 1005 10 > th dose independent rect. 24 9
102 27.27 temperature 25 270 > th dose dependent rect. 10 3
109 27.28 atmosphere 1010 270 < th dose dependent rect. 21 10
126 27.32 temperature 25 1440 < th dose independent rect. 24 1
133 27.34 atmosphere 1005 10 > th dose dependent rect. 24 5
136 27.35 atmosphere 1005 720 > th dose independent rect. 23 2
142 27.37 humidity 80 4320 > th dose independent rect. 23 2
143 27.37 humidity 80 4320 < th dose independent rect. 21 5
148 27.38 radiation 30 30 > th dose independent rect. 12 23
154 27.40 humidity 80 4320 > th dose independent rect. 21 6
156 27.40 temperature 25 720 < th dose independent rect. 21 9
158 27.40 humidity 80 4320 < th dose dependent rect. 23 2
161 27.41 radiation 30 30 > th dose independent rect. 12 3
167 27.41 humidity 80 4320 < th dose dependent rect. 21 4
187 27.44 atmosphere 1005 30 > th dose independent rect. 12 3
188 27.44 temperature 25 10 > th dose independent rect. 24 7
204 27.47 temperature 25 10 > th dose independent rect. 24 9
220 27.49 atmosphere 1005 90 < th dose independent rect. 24 9
225 27.49 atmosphere 1005 270 > th dose dependent rect. 2 1
288 27.53 temperature 30 10 < th dose independent rect. 15 23
291 27.54 temperature 25 720 > th dose independent rect. 21 1
295 27.54 temperature 25 270 > th dose dependent rect. 19 18
308 27.56 humidity 60 30 > th dose independent rect. 12 14
328 27.58 temperature 25 30 > th dose dependent rect. 12 3
339 27.60 atmosphere 1005 10 < th dose independent rect. 24 8
345 27.60 radiation 20 30 > th dose dependent rect. 12 3
349 27.60 atmosphere 1010 10 < th dose dependent rect. 20 14
356 27.61 wind 1 720 > th dose independent rect. 15 10
388 27.63 atmosphere 1010 10 < th dose dependent rect. 22 12
390 27.63 radiation 20 30 > th dose dependent rect. 12 23
395 27.64 atmosphere 1005 30 > th dose dependent rect. 12 3
398 27.64 atmosphere 995 10 > th dose dependent rect. 2 10
430 27.67 atmosphere 1010 720 < th dose dependent rect. 21 3
438 27.68 atmosphere 1005 720 > th dose dependent rect. 21 4
495 27.73 atmosphere 1010 30 < th dose dependent rect. 1 10
564 27.77 atmosphere 1005 10 > th dose independent rect. 24 7
568 27.77 atmosphere 1005 10 > th dose independent rect. 24 12
585 27.78 humidity 90 10 < th dose independent rect. 4 8
612 27.79 radiation 40 270 > th dose independent rect. 12 1
660 27.82 atmosphere 1010 720 < th dose dependent rect. 23 1
672 27.83 temperature 30 270 > th dose independent rect. 12 1
679 27.83 humidity 90 10 < th dose independent rect. 24 12
714 27.84 atmosphere 1005 10 > th dose dependent rect. 2 5
742 27.86 temperature 30 30 < th dose independent rect. 2 10
750 27.86 atmosphere 1005 30 > th dose dependent rect. 12 5
771 27.87 wind 7 720 < th dose independent rect. 15 10
808 27.88 humidity 90 90 > th dose dependent rect. 24 18
842 27.90 humidity 90 10 < th dose independent rect. 4 16
855 27.91 atmosphere 1005 30 > th dose independent rect. 12 11
891 27.92 atmosphere 1010 30 < th dose dependent sin 8 NA
903 27.93 temperature 15 1440 > th dose independent rect. 13 1
907 27.93 atmosphere 1005 720 > th dose independent rect. 19 6
932 27.94 temperature 15 30 > th dose independent rect. 12 14
933 27.94 wind 3 90 > th dose independent rect. 20 19
946 27.95 temperature 25 270 > th dose independent rect. 9 4
948 27.95 atmosphere 1005 10 > th dose independent rect. 12 5
958 27.95 temperature 25 270 > th dose dependent rect. 2 2
962 27.95 humidity 90 90 > th dose dependent rect. 24 12
971 27.96 temperature 25 720 < th dose independent rect. 21 2
982 27.96 atmosphere 1005 30 > th dose dependent sin 7 NA