Os11g0672400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
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Os11g0672400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Kinesin, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.97 | 0.577 | 3.89 | 0.348 | 0.407 | -2.74 | -0.127 | -5.69 | 0.87 | 22.3 | 1016 | 4316 | -- | -- |
| 160.14 | 0.589 | 3.93 | 0.203 | 0.322 | -0.686 | -0.178 | -- | 0.842 | 0.817 | 1013 | 4980 | -- | -- |
| 150.97 | 0.572 | 3.88 | 0.363 | 0.398 | -2.96 | -- | -6.18 | 0.873 | 22.2 | 1016 | 4315 | -- | -- |
| 156.51 | 0.583 | 3.96 | 0.0651 | 0.399 | -0.668 | -- | -- | 0.787 | 22.3 | 1013 | 5679 | -- | -- |
| 161.02 | 0.591 | 3.87 | 0.338 | -- | -3 | -- | -6.12 | 0.867 | -- | 1016 | 4323 | -- | -- |
| 167.38 | 0.607 | 3.93 | 0.273 | 0.395 | -- | -0.218 | -- | 0.907 | 22.5 | -- | -- | -- | -- |
| 167.57 | 0.606 | 3.93 | 0.282 | 0.396 | -- | -- | -- | 0.908 | 22.4 | -- | -- | -- | -- |
| 166.24 | 0.601 | 3.95 | 0.0759 | -- | -0.656 | -- | -- | 0.779 | -- | 1013 | 5660 | -- | -- |
| 156.54 | 0.583 | 3.96 | -- | 0.403 | -0.633 | -- | -- | 0.775 | 22.3 | 1013 | 6346 | -- | -- |
| 177.18 | 0.622 | 3.92 | 0.288 | -- | -- | -- | -- | 0.909 | -- | -- | -- | -- | -- |
| 169.67 | 0.609 | 3.93 | -- | 0.398 | -- | -- | -- | 0.876 | 22.5 | -- | -- | -- | -- |
| 166.41 | 0.601 | 3.95 | -- | -- | -0.63 | -- | -- | 0.776 | -- | 1013 | 6347 | -- | -- |
| 179.38 | 0.625 | 3.92 | -- | -- | -- | -- | -- | 0.877 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.28 | wind | 3.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 2 | 149.49 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 7 | 150.65 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 9 | 150.68 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 13 | 150.71 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 21 | 151.00 | wind | 3.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 24 | 151.13 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 76 | 151.90 | wind | 5.0 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 93 | 152.04 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 96 | 152.05 | wind | 5.0 | 1440 | > th | dose independent | rect. | 23 | 7 |
| 100 | 152.09 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 14 |
| 109 | 152.13 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 6 | 10 |
| 163 | 152.27 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 180 | 152.32 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 185 | 152.33 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 1 | NA |
| 201 | 152.36 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 284 | 152.59 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 14 |
| 289 | 152.60 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 12 |
| 295 | 152.61 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 298 | 152.61 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 21 |
| 307 | 152.62 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 19 |
| 319 | 152.64 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 17 |
| 363 | 152.74 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 6 | 14 |
| 377 | 152.76 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 6 | 11 |
| 415 | 152.79 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 14 | 20 |
| 441 | 152.81 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 475 | 152.87 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 5 | 14 |
| 535 | 152.93 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 2 | NA |
| 553 | 152.94 | atmosphere | 1015.0 | 4320 | > th | dose dependent | no | NA | NA |
| 604 | 153.01 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 2 | NA |
| 658 | 153.09 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 739 | 153.21 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 742 | 153.22 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 755 | 153.24 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 808 | 153.32 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 824 | 153.34 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 13 | 7 |
| 869 | 153.41 | humidity | 50.0 | 4320 | < th | dose independent | sin | 18 | NA |
| 905 | 153.47 | humidity | 50.0 | 4320 | > th | dose independent | sin | 17 | NA |
| 965 | 153.56 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 23 |
| 969 | 153.57 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 977 | 153.57 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 2 |