Os11g0659200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF581 family protein.
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Os11g0659200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF581 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.1 | 0.358 | 2.89 | 0.168 | 0.168 | 2.23 | -0.0593 | 8.56 | 0.0944 | 7.85 | 10.3 | 629 | -- | -- |
| 66.41 | 0.38 | 2.86 | 0.393 | 0.135 | 1.61 | 0.0591 | -- | 0.222 | 7.34 | 10.35 | 406 | -- | -- |
| 58.04 | 0.355 | 2.89 | 0.184 | 0.165 | 2.42 | -- | 9.66 | 0.0953 | 7.9 | 10.38 | 605 | -- | -- |
| 60.23 | 0.361 | 2.86 | 0.0812 | 0.167 | 0.591 | -- | -- | 0.0995 | 6.87 | 10.1 | 415 | -- | -- |
| 59.47 | 0.359 | 2.9 | 0.187 | -- | 2.46 | -- | 10.2 | 0.0945 | -- | 10.42 | 594 | -- | -- |
| 61.15 | 0.367 | 2.87 | 0.0476 | 0.15 | -- | -0.0743 | -- | 0.0855 | 7.42 | -- | -- | -- | -- |
| 61.16 | 0.366 | 2.87 | 0.0459 | 0.15 | -- | -- | -- | 0.0857 | 7.48 | -- | -- | -- | -- |
| 61.68 | 0.366 | 2.86 | 0.0767 | -- | 0.48 | -- | -- | 0.0977 | -- | 10.1 | 412 | -- | -- |
| 60.35 | 0.362 | 2.86 | -- | 0.167 | 0.546 | -- | -- | 0.0931 | 7.42 | 10.1 | 415 | -- | -- |
| 62.36 | 0.369 | 2.87 | 0.0483 | -- | -- | -- | -- | 0.0881 | -- | -- | -- | -- | -- |
| 61.22 | 0.366 | 2.87 | -- | 0.15 | -- | -- | -- | 0.0806 | 7.46 | -- | -- | -- | -- |
| 61.82 | 0.366 | 2.87 | -- | -- | 0.441 | -- | -- | 0.0903 | -- | 10.1 | 415 | -- | -- |
| 62.42 | 0.369 | 2.87 | -- | -- | -- | -- | -- | 0.0827 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.45 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 1 |
| 8 | 56.45 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 56.45 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 29 | 56.86 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 1 |
| 33 | 57.15 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 34 | 57.23 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 22 | 8 |
| 41 | 57.26 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 69 | 57.41 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 23 | 7 |
| 87 | 57.49 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 19 | 1 |
| 103 | 57.56 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 116 | 57.59 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 8 |
| 138 | 57.63 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 18 | 13 |
| 288 | 58.01 | wind | 1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 289 | 58.03 | wind | 5 | 10 | > th | dose independent | rect. | 21 | 2 |
| 290 | 58.04 | atmosphere | 1000 | 90 | < th | dose dependent | sin | 11 | NA |
| 323 | 58.19 | wind | 7 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 324 | 58.19 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 348 | 58.27 | atmosphere | 1000 | 10 | < th | dose independent | sin | 11 | NA |
| 350 | 58.27 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 1 |
| 381 | 58.35 | wind | 1 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 404 | 58.38 | wind | 1 | 270 | < th | dose independent | rect. | 19 | 1 |
| 407 | 58.38 | wind | 1 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 411 | 58.39 | wind | 7 | 90 | > th | dose independent | rect. | 1 | 8 |
| 413 | 58.39 | wind | 5 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 423 | 58.40 | wind | 7 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 434 | 58.41 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 504 | 58.45 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 22 | 1 |
| 505 | 58.45 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 1 |
| 510 | 58.45 | wind | 7 | 90 | > th | dose independent | rect. | 7 | 2 |
| 525 | 58.45 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 548 | 58.46 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 644 | 58.53 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 1 |
| 706 | 58.57 | wind | 9 | 720 | > th | dose dependent | sin | 12 | NA |
| 765 | 58.61 | wind | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 818 | 58.65 | wind | 7 | 10 | > th | dose independent | rect. | 21 | 7 |
| 834 | 58.65 | wind | 7 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 873 | 58.67 | wind | 9 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 877 | 58.68 | wind | 9 | 30 | > th | dose independent | rect. | 21 | 5 |
| 904 | 58.68 | wind | 9 | 30 | > th | dose dependent | rect. | 21 | 5 |