BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0659200 Os11g0659200|J075043D24
(150 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G78020.1 | chr1:29338787-29339491 FORWARD LENGTH=163 67 3e-12
AT5G49120.1 | chr5:19908800-19909332 REVERSE LENGTH=151 62 1e-10
AT3G63210.1 | chr3:23354019-23354906 REVERSE LENGTH=264 62 1e-10
AT1G22160.1 | chr1:7823238-7823774 FORWARD LENGTH=148 58 2e-09
AT5G20700.1 | chr5:7006178-7007003 REVERSE LENGTH=249 57 2e-09
AT2G44670.1 | chr2:18425279-18425673 FORWARD LENGTH=94 54 4e-08
AT5G47060.1 | chr5:19116843-19117639 FORWARD LENGTH=178 53 7e-08
AT3G22550.1 | chr3:7991827-7992805 REVERSE LENGTH=268 51 2e-07
AT4G17670.1 | chr4:9833948-9834663 REVERSE LENGTH=160 50 3e-07
AT2G25690.1 | chr2:10940530-10941649 REVERSE LENGTH=325 50 3e-07
AT4G39795.1 | chr4:18466621-18467325 FORWARD LENGTH=127 50 6e-07
AT5G11460.1 | chr5:3657064-3658388 REVERSE LENGTH=345 49 7e-07
AT5G65040.1 | chr5:25977864-25978350 REVERSE LENGTH=114 49 9e-07
AT1G53903.1 | chr1:20132363-20132842 FORWARD LENGTH=127 47 5e-06
AT1G53885.1 | chr1:20119798-20120277 FORWARD LENGTH=127 47 5e-06
AT1G74940.1 | chr1:28146284-28147065 FORWARD LENGTH=223 47 5e-06
>AT1G78020.1 | chr1:29338787-29339491 FORWARD LENGTH=163
Length = 162
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEEDGDMSCRAKDAAVAAP 128
FL C LC R L G DIY+YRGD+AFCS +CR + +E +E G + AK+ AV AP
Sbjct: 89 FLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDERKEKGKSAAPAKEPAVTAP 148
>AT5G49120.1 | chr5:19908800-19909332 REVERSE LENGTH=151
Length = 150
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEE 111
FL CFLCRR+L DIY+Y+GDRAFCS +CR + ++ +EEE
Sbjct: 68 FLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEE 110
>AT3G63210.1 | chr3:23354019-23354906 REVERSE LENGTH=264
Length = 263
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 65 TTASFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEE 111
+T SFL RCF C++ L DIYIYRG++ FCS +CR++ +L ++ E
Sbjct: 216 STESFLSRCFTCKKNLDQKQDIYIYRGEKGFCSSECRYQEMLLDQME 262
>AT1G22160.1 | chr1:7823238-7823774 FORWARD LENGTH=148
Length = 147
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 66 TASFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEEDGDMSCRA 120
+ FL C LC+R L G DIY+YRGDRAFCS +CR + I +E +E S R+
Sbjct: 75 SEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKKKGSVRS 129
>AT5G20700.1 | chr5:7006178-7007003 REVERSE LENGTH=249
Length = 248
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEEDGDMSCRAK 121
FL+ C+LCR++L G DI+IYRG++AFCS +CR HI +E +E CR+K
Sbjct: 182 FLNSCYLCRKKLHG-QDIFIYRGEKAFCSTECRSSHIANDERKE----RCRSK 229
>AT2G44670.1 | chr2:18425279-18425673 FORWARD LENGTH=94
Length = 93
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEE 112
FL C LCR+ L DI++YRGD+AFCS++CR I ++E +E
Sbjct: 16 FLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKE 59
>AT5G47060.1 | chr5:19116843-19117639 FORWARD LENGTH=178
Length = 177
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEE-EEEDGDMSCRAKDA 123
FL CFLC++ L DIY+YRGD FCS++CR I +E +E+ ++S K A
Sbjct: 97 FLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKEKKQNLSHSVKSA 152
>AT3G22550.1 | chr3:7991827-7992805 REVERSE LENGTH=268
Length = 267
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 68 SFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEE 112
SFL C C++ L DDI++YRGDRAFCS +CR ++ EE +
Sbjct: 221 SFLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMMSEEND 265
>AT4G17670.1 | chr4:9833948-9834663 REVERSE LENGTH=160
Length = 159
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEE 112
FL CFLC++ L DI++YRGD FCS++CR I +E +E
Sbjct: 76 FLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKE 119
>AT2G25690.1 | chr2:10940530-10941649 REVERSE LENGTH=325
Length = 324
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 63 VATTASFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEE 111
V + +FL C C ++L GGDDIY+YR +++FCS++CR ++ +EE+
Sbjct: 261 VFPSDNFLGICNFCNKKLGGGDDIYMYR-EKSFCSEECRSEEMMIDEED 308
>AT4G39795.1 | chr4:18466621-18467325 FORWARD LENGTH=127
Length = 126
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 64 ATTASFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEE 109
++ +SFL C C+R LA G DIY+Y+GD AFCS +CR + + +E
Sbjct: 68 SSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDE 113
>AT5G11460.1 | chr5:3657064-3658388 REVERSE LENGTH=345
Length = 344
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 59 APVVVATTASFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHI 105
PV V FL C+ C ++L G+DIY+Y G +AFCS +CR + I
Sbjct: 261 TPVDVLPPKDFLSFCYGCSKKLGMGEDIYMYSGYKAFCSSECRSKEI 307
>AT5G65040.1 | chr5:25977864-25978350 REVERSE LENGTH=114
Length = 113
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 60 PVVVATTA--SFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEE 111
P+VV + FL C LC R L DIY+YRG+ AFCS +CR + I +E++
Sbjct: 46 PMVVMASNYDDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKK 99
>AT1G53903.1 | chr1:20132363-20132842 FORWARD LENGTH=127
Length = 126
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEE 112
FL C LC ++L D+Y+YRGD FCS +CR +L ++ +E
Sbjct: 42 FLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDDRKE 85
>AT1G53885.1 | chr1:20119798-20120277 FORWARD LENGTH=127
Length = 126
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 69 FLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEE 112
FL C LC ++L D+Y+YRGD FCS +CR +L ++ +E
Sbjct: 42 FLKTCHLCNKQLHQDKDVYMYRGDLGFCSRECRESQMLIDDRKE 85
>AT1G74940.1 | chr1:28146284-28147065 FORWARD LENGTH=223
Length = 222
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 59 APVV----VATTASFLHRCFLCRRELAGGDDIYIYRGDRAFCSDDCRFRHILTEEEEE 112
PV+ V FL C LC+++L G DIY+Y+G+ FCS +CR I+ +E +E
Sbjct: 136 PPVIERQSVRGPTEFLSSCCLCKKKLQG-KDIYMYKGEMGFCSAECRSVQIMNDERQE 192
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.139 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,813,715
Number of extensions: 103213
Number of successful extensions: 292
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 288
Number of HSP's successfully gapped: 17
Length of query: 150
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 60
Effective length of database: 8,639,129
Effective search space: 518347740
Effective search space used: 518347740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 107 (45.8 bits)