Os11g0629400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nitrilase associated protein-like.
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Os11g0629400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nitrilase associated protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.53 | 0.503 | 12.8 | -2.53 | 1.6 | 2.07 | 0.521 | -3.21 | -0.6 | 8.21 | 20.8 | 1387 | -- | -- |
| 119.4 | 0.509 | 12.7 | -1.7 | 2.09 | 2.59 | 0.524 | -- | -0.393 | 8.47 | 16.15 | 882 | -- | -- |
| 114.54 | 0.498 | 12.9 | -2.62 | 1.68 | 2.17 | -- | -3.79 | -0.65 | 8.42 | 21.2 | 1267 | -- | -- |
| 119.77 | 0.51 | 12.7 | -1.64 | 2.06 | 2.85 | -- | -- | -0.353 | 8.4 | 14.79 | 897 | -- | -- |
| 255.66 | 0.745 | 12.9 | -2.59 | -- | 2.11 | -- | -3.56 | -0.633 | -- | 21.3 | 1404 | -- | -- |
| 237.27 | 0.722 | 12.6 | -0.875 | 1.61 | -- | 0.597 | -- | 0.113 | 7.8 | -- | -- | -- | -- |
| 238.3 | 0.723 | 12.6 | -0.859 | 1.61 | -- | -- | -- | 0.112 | 7.8 | -- | -- | -- | -- |
| 259.86 | 0.751 | 12.8 | -1.68 | -- | 2.62 | -- | -- | -0.35 | -- | 13.89 | 1421 | -- | -- |
| 181.08 | 0.63 | 12.7 | -- | 1.85 | 2.52 | -- | -- | -0.113 | 6.23 | 15.77 | 762 | -- | -- |
| 378.16 | 0.909 | 12.7 | -0.84 | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
| 257.76 | 0.751 | 12.6 | -- | 1.6 | -- | -- | -- | 0.208 | 7.83 | -- | -- | -- | -- |
| 323.93 | 0.838 | 12.7 | -- | -- | 1.91 | -- | -- | -0.0584 | -- | 13.89 | 1411 | -- | -- |
| 396.76 | 0.93 | 12.6 | -- | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.76 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 2 | 113.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 3 | 113.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 5 | 113.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 8 | 113.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 20 | 114.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 55 | 114.89 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 97 | 115.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 102 | 115.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 107 | 115.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 131 | 116.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 136 | 116.16 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 138 | 116.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 139 | 116.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 141 | 116.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 155 | 116.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 175 | 116.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 181 | 116.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 23 |
| 196 | 116.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 226 | 116.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 260 | 116.96 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 261 | 116.98 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 263 | 116.99 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 284 | 117.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 301 | 117.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 316 | 117.39 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 331 | 117.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 332 | 117.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 333 | 117.50 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 378 | 117.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 415 | 118.06 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 473 | 118.41 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 475 | 118.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 481 | 118.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 487 | 118.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 498 | 118.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 501 | 118.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 578 | 119.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 630 | 119.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 851 | 120.09 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |