Os11g0614500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Patatin-like protein 3.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0614500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Patatin-like protein 3.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 320.06 | 0.841 | 5.27 | -4.01 | 1.1 | 1.4 | -2.42 | -1.57 | -0.491 | 0.855 | 20.54 | 514 | -- | -- |
| 327.75 | 0.843 | 5.23 | -3.72 | 1.1 | 1.57 | -2.55 | -- | -0.443 | 0.853 | 20.6 | 517 | -- | -- |
| 340.42 | 0.859 | 5.29 | -4.12 | 0.982 | 1.34 | -- | -2.34 | -0.531 | 0.384 | 20.5 | 752 | -- | -- |
| 354.88 | 0.877 | 5.22 | -3.64 | 1.04 | 1.57 | -- | -- | -0.421 | 0.688 | 20.5 | 590 | -- | -- |
| 393.18 | 0.924 | 5.3 | -4.27 | -- | 1.59 | -- | -2.24 | -0.642 | -- | 21.2 | 907 | -- | -- |
| 401.84 | 0.94 | 5.16 | -3.19 | 1.15 | -- | -2.54 | -- | -0.0923 | 0.275 | -- | -- | -- | -- |
| 429.44 | 0.97 | 5.15 | -3.09 | 1.16 | -- | -- | -- | -0.0789 | 0.0753 | -- | -- | -- | -- |
| 409.69 | 0.943 | 5.26 | -3.79 | -- | 1.82 | -- | -- | -0.63 | -- | 21.2 | 904 | -- | -- |
| 665.68 | 1.21 | 5.1 | -- | 1.25 | 0.581 | -- | -- | 0.169 | 0.0307 | 20.52 | 576 | -- | -- |
| 514.42 | 1.06 | 5.13 | -3.05 | -- | -- | -- | -- | -0.0622 | -- | -- | -- | -- | -- |
| 680.77 | 1.22 | 5.07 | -- | 1.12 | -- | -- | -- | 0.265 | 23.9 | -- | -- | -- | -- |
| 727.23 | 1.26 | 5.09 | -- | -- | 0.816 | -- | -- | -0.0026 | -- | 22.4 | 858 | -- | -- |
| 760.01 | 1.29 | 5.05 | -- | -- | -- | -- | -- | 0.276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 310.51 | temperature | 25 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 31 | 318.75 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 20 |
| 35 | 319.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 55 | 321.17 | temperature | 20 | 270 | < th | dose independent | rect. | 4 | 19 |
| 74 | 322.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 79 | 322.50 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 22 |
| 81 | 322.62 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 22 |
| 87 | 322.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 89 | 323.04 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 104 | 323.33 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 21 |
| 105 | 323.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 123 | 323.74 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 19 |
| 127 | 323.81 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 16 |
| 133 | 324.03 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 170 | 324.78 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 21 |
| 186 | 325.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 2 |
| 189 | 325.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 195 | 325.28 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 243 | 325.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 248 | 326.08 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 256 | 326.12 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 272 | 326.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 281 | 326.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 284 | 326.55 | temperature | 25 | 270 | < th | dose dependent | sin | 22 | NA |
| 286 | 326.58 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 302 | 326.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 6 |
| 303 | 326.78 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 335 | 327.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 364 | 327.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 366 | 327.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 369 | 327.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 395 | 327.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 7 |
| 401 | 327.60 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 472 | 327.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 479 | 328.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 482 | 328.01 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 23 |
| 504 | 328.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 531 | 328.30 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 535 | 328.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 627 | 328.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 648 | 329.01 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 682 | 329.16 | temperature | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 801 | 329.70 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 857 | 329.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 23 |