Os11g0602600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 40S ribosomal protein S9.
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Os11g0602600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 40S ribosomal protein S9.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.16 | 0.407 | 14.6 | -0.362 | 0.842 | 0.763 | 0.53 | -1.85 | -0.245 | 18.5 | 20.53 | 2775 | -- | -- |
| 80.76 | 0.419 | 14.5 | -0.00494 | 0.842 | 1.05 | 0.626 | -- | -0.157 | 18.4 | 20.22 | 2699 | -- | -- |
| 75.8 | 0.405 | 14.6 | -0.368 | 0.838 | 0.771 | -- | -1.84 | -0.249 | 18.4 | 20.5 | 2720 | -- | -- |
| 80.51 | 0.418 | 14.5 | -0.0689 | 0.84 | 1.21 | -- | -- | -0.165 | 18.4 | 19.44 | 2775 | -- | -- |
| 103.79 | 0.474 | 14.6 | 0.0539 | -- | 0.706 | -- | -0.503 | -0.338 | -- | 25.8 | 369 | -- | -- |
| 104.3 | 0.479 | 14.4 | 0.561 | 0.813 | -- | 0.754 | -- | 0.117 | 18.6 | -- | -- | -- | -- |
| 105.73 | 0.482 | 14.4 | 0.55 | 0.816 | -- | -- | -- | 0.119 | 18.6 | -- | -- | -- | -- |
| 99.7 | 0.465 | 14.5 | 0.294 | -- | 0.823 | -- | -- | -0.144 | -- | 26.2 | 381 | -- | -- |
| 80.54 | 0.418 | 14.5 | -- | 0.849 | 1.2 | -- | -- | -0.133 | 18.5 | 19.32 | 2798 | -- | -- |
| 140.42 | 0.554 | 14.4 | 0.53 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 113.69 | 0.499 | 14.4 | -- | 0.809 | -- | -- | -- | 0.058 | 18.7 | -- | -- | -- | -- |
| 102.19 | 0.471 | 14.5 | -- | -- | 0.843 | -- | -- | -0.155 | -- | 26.34 | 390 | -- | -- |
| 147.84 | 0.568 | 14.4 | -- | -- | -- | -- | -- | 0.0439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 2 | 73.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 9 | 74.11 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 11 | 74.16 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 18 | 74.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 34 | 74.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 12 |
| 38 | 74.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 131 | 75.40 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 146 | 75.52 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 170 | 75.68 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 181 | 75.76 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 251 | 76.12 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 413 | 76.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 463 | 77.05 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 490 | 77.15 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 560 | 77.43 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 570 | 77.46 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 571 | 77.46 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 663 | 77.76 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 685 | 77.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 21 |
| 692 | 77.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 698 | 77.85 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 735 | 77.92 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 804 | 78.04 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 7 |
| 806 | 78.05 | humidity | 90 | 14400 | > th | dose independent | rect. | 15 | 13 |
| 831 | 78.08 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 833 | 78.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 4 |
| 848 | 78.09 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 13 |
| 943 | 78.20 | temperature | 20 | 4320 | > th | dose independent | rect. | 5 | 23 |
| 959 | 78.22 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 985 | 78.26 | temperature | 20 | 4320 | > th | dose dependent | sin | 21 | NA |
| 986 | 78.26 | humidity | 90 | 14400 | > th | dose dependent | sin | 15 | NA |
| 987 | 78.26 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 988 | 78.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 995 | 78.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 23 |