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Os11g0600700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RING domain protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0142) R2 : 0.0116
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0691 (0.0299) R2dN8 : 0.015 R2N8 : 0.0116
σ : 0.268
deviance : 32.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.24 0.222 9.6 -0.113 0.377 -0.239 -0.331 -0.0868 -0.0912 7.3 20.57 10 -- --
22.28 0.22 9.6 -0.116 0.378 -0.241 -0.35 -- -0.0892 7.34 20.59 10 -- --
22.51 0.221 9.6 -0.114 0.373 -0.245 -- -0.148 -0.0907 7.42 20.56 10 -- --
22.63 0.222 9.6 -0.123 0.376 -0.246 -- -- -0.0915 7.38 20.59 10 -- --
29.9 0.255 9.6 -0.0964 -- -0.203 -- -0.226 -0.0701 -- 21.09 11 -- --
24.76 0.233 9.6 -0.147 0.378 -- -0.329 -- -0.0947 5.62 -- -- -- --
25.02 0.234 9.6 -0.149 0.376 -- -- -- -0.0934 5.48 -- -- -- --
29.89 0.255 9.61 -0.122 -- -0.192 -- -- -0.0847 -- 21.05 10 -- --
23.02 0.223 9.6 -- 0.379 -0.256 -- -- -0.0765 7.47 20.56 10 -- --
32.36 0.266 9.61 -0.136 -- -- -- -- -0.0842 -- -- -- -- --
25.6 0.237 9.6 -- 0.373 -- -- -- -0.0769 5.5 -- -- -- --
30.28 0.256 9.61 -- -- -0.185 -- -- -0.0763 -- 21.02 10 -- --
32.85 0.268 9.6 -- -- -- -- -- -0.0691 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.80 temperature 10.0 270 > th dose dependent rect. 18 18
7 18.39 temperature 15.0 10 > th dose dependent rect. 9 5
12 18.55 temperature 15.0 270 > th dose dependent rect. 7 5
18 18.63 temperature 20.0 270 > th dose independent rect. 18 18
21 18.65 temperature 15.0 270 > th dose dependent rect. 8 3
24 18.68 temperature 15.0 10 > th dose dependent rect. 20 18
30 18.76 temperature 20.0 270 > th dose independent rect. 7 5
36 18.82 temperature 20.0 10 > th dose independent rect. 9 5
40 18.85 humidity 90.0 270 < th dose independent rect. 8 4
42 18.85 temperature 15.0 270 > th dose dependent rect. 9 1
50 18.89 temperature 20.0 270 > th dose independent rect. 8 3
89 19.08 wind 5.0 270 < th dose independent rect. 7 5
95 19.11 temperature 20.0 270 > th dose independent rect. 9 1
100 19.13 wind 5.0 270 < th dose independent rect. 8 3
106 19.15 humidity 90.0 10 < th dose independent rect. 9 5
128 19.31 wind 7.0 10 < th dose independent rect. 9 5
130 19.31 wind 9.0 270 < th dose dependent rect. 7 5
137 19.32 temperature 15.0 270 > th dose independent rect. 8 15
162 19.40 wind 5.0 270 < th dose independent rect. 18 18
171 19.44 atmosphere 1015.0 270 < th dose dependent rect. 8 3
176 19.45 atmosphere 1015.0 1440 < th dose independent rect. 15 4
182 19.45 wind 9.0 270 < th dose dependent rect. 18 18
191 19.48 atmosphere 1015.0 10 < th dose dependent rect. 9 5
194 19.49 wind 9.0 270 < th dose dependent rect. 8 3
203 19.52 wind 5.0 270 < th dose independent rect. 9 1
205 19.52 wind 1.0 270 > th dose independent rect. 12 19
236 19.59 temperature 30.0 270 < th dose dependent rect. 24 7
250 19.61 temperature 30.0 270 < th dose dependent rect. 23 9
254 19.62 wind 1.0 270 > th dose independent rect. 12 6
259 19.63 radiation 1.0 270 > th dose independent rect. 8 3
266 19.64 atmosphere 1015.0 1440 < th dose independent rect. 2 8
267 19.64 wind 5.0 270 < th dose independent rect. 17 20
279 19.66 radiation 1.0 270 > th dose independent rect. 7 5
294 19.68 atmosphere 1010.0 30 < th dose independent rect. 9 5
301 19.69 precipitation 0.1 270 < th dose independent rect. 23 9
305 19.69 precipitation 0.1 270 < th dose dependent rect. 23 9
308 19.70 wind 5.0 90 < th dose independent rect. 9 16
315 19.71 radiation 1.0 270 > th dose independent rect. 9 1
333 19.73 wind 9.0 270 < th dose independent rect. 12 6
349 19.75 temperature 10.0 270 > th dose independent rect. 12 6
352 19.75 atmosphere 1010.0 270 < th dose independent rect. 12 6
355 19.75 atmosphere 995.0 270 > th dose independent rect. 18 18
368 19.77 atmosphere 1015.0 270 < th dose dependent rect. 13 4
381 19.80 radiation 20.0 270 < th dose independent rect. 23 9
387 19.81 radiation 1.0 270 > th dose independent rect. 12 18
420 19.86 wind 7.0 270 < th dose independent rect. 23 9
422 19.86 temperature 10.0 270 > th dose independent rect. 23 9
424 19.86 temperature 30.0 270 < th dose independent rect. 23 9
425 19.86 humidity 50.0 270 > th dose independent rect. 23 9
428 19.86 atmosphere 995.0 270 > th dose independent rect. 23 9
431 19.86 wind 9.0 270 < th dose dependent rect. 9 1
450 19.88 wind 9.0 270 < th dose independent rect. 8 15
464 19.90 radiation 1.0 270 > th dose independent rect. 13 4
466 19.90 precipitation 0.1 270 < th dose independent rect. 18 18
467 19.90 wind 9.0 10 < th dose independent rect. 14 19
471 19.90 precipitation 0.1 270 < th dose dependent rect. 18 18
473 19.91 precipitation 0.1 270 < th dose independent rect. 12 6
476 19.91 precipitation 0.1 270 < th dose dependent rect. 12 6
479 19.92 atmosphere 995.0 90 > th dose independent rect. 9 16
487 19.93 precipitation 0.1 270 < th dose independent rect. 8 15
493 19.93 precipitation 0.1 270 < th dose dependent rect. 8 15
495 19.94 wind 1.0 270 > th dose independent rect. 13 4
497 19.94 temperature 10.0 10 > th dose independent rect. 9 5
499 19.94 atmosphere 995.0 10 > th dose independent rect. 9 5
501 19.94 precipitation 0.1 10 < th dose independent rect. 9 5
505 19.94 temperature 10.0 10 > th dose independent rect. 14 19
506 19.94 precipitation 0.1 10 < th dose dependent rect. 9 5
513 19.95 wind 1.0 10 > th dose independent rect. 9 5
522 19.96 radiation 1.0 270 > th dose independent rect. 12 6
526 19.96 precipitation 0.1 10 < th dose independent rect. 14 19
530 19.96 precipitation 0.1 10 < th dose dependent rect. 14 19
547 19.97 radiation 40.0 10 < th dose independent rect. 14 19
550 19.97 radiation 40.0 270 < th dose dependent rect. 23 9
559 19.98 radiation 1.0 10 > th dose independent rect. 9 5
562 19.98 temperature 30.0 90 < th dose independent rect. 1 8
563 19.98 atmosphere 1015.0 270 < th dose independent rect. 23 9
577 19.99 temperature 10.0 1440 > th dose independent rect. 10 5
580 19.99 humidity 50.0 270 > th dose independent rect. 18 18
581 19.99 wind 7.0 270 < th dose independent rect. 12 19
582 19.99 temperature 10.0 1440 > th dose independent rect. 15 19
586 19.99 temperature 10.0 270 > th dose dependent rect. 12 6
599 20.01 precipitation 0.1 90 < th dose independent rect. 1 8
603 20.01 precipitation 0.1 90 < th dose dependent rect. 1 8
616 20.03 radiation 30.0 90 < th dose independent rect. 1 8
655 20.06 temperature 10.0 270 > th dose independent rect. 13 4
658 20.06 atmosphere 1010.0 270 < th dose independent rect. 13 4
675 20.06 precipitation 0.1 270 < th dose independent rect. 17 20
680 20.06 precipitation 0.1 270 < th dose dependent rect. 17 20
686 20.07 precipitation 0.1 270 < th dose independent rect. 13 4
696 20.07 precipitation 0.1 270 < th dose dependent rect. 13 4
702 20.08 wind 1.0 270 > th dose independent rect. 23 9
709 20.09 wind 1.0 270 > th dose independent rect. 8 3
711 20.09 precipitation 0.1 270 < th dose independent rect. 8 3
713 20.09 humidity 70.0 90 > th dose independent rect. 1 8
715 20.09 precipitation 0.1 270 < th dose dependent rect. 8 3
719 20.09 wind 9.0 270 < th dose dependent rect. 8 15
730 20.10 wind 9.0 270 < th dose independent rect. 11 21
740 20.11 temperature 10.0 43200 > th dose independent rect. 15 5
746 20.11 humidity 50.0 14400 > th dose independent rect. 2 7
751 20.11 temperature 10.0 270 > th dose independent rect. 12 19
757 20.12 atmosphere 995.0 270 > th dose independent rect. 8 3
770 20.12 temperature 10.0 270 > th dose independent rect. 11 21
776 20.13 humidity 50.0 270 > th dose independent rect. 8 3
789 20.14 wind 1.0 270 > th dose independent rect. 24 7
790 20.14 wind 9.0 90 < th dose independent rect. 1 8
791 20.14 temperature 10.0 90 > th dose independent rect. 1 8
793 20.14 humidity 50.0 90 > th dose independent rect. 1 8
795 20.14 atmosphere 995.0 90 > th dose independent rect. 1 8
796 20.14 atmosphere 1015.0 90 < th dose independent rect. 1 8
820 20.17 humidity 50.0 270 > th dose independent rect. 7 5
834 20.17 temperature 10.0 270 > th dose dependent rect. 13 4
859 20.19 precipitation 0.1 270 < th dose independent rect. 9 1
869 20.19 precipitation 0.1 270 < th dose independent rect. 12 19
870 20.19 precipitation 0.1 270 < th dose dependent rect. 9 1
873 20.19 precipitation 0.1 270 < th dose dependent rect. 12 19
878 20.20 temperature 20.0 10 > th dose independent rect. 20 18
905 20.22 atmosphere 1015.0 10 < th dose independent rect. 14 19
911 20.22 atmosphere 1015.0 90 < th dose dependent rect. 14 18
914 20.23 atmosphere 995.0 270 > th dose independent rect. 9 1
918 20.23 humidity 90.0 270 < th dose independent rect. 13 4
921 20.23 precipitation 0.1 270 < th dose independent rect. 6 7
924 20.23 temperature 10.0 270 > th dose independent rect. 10 23
930 20.23 precipitation 0.1 270 < th dose dependent rect. 6 7
945 20.24 humidity 90.0 10 < th dose dependent rect. 9 5
948 20.25 humidity 50.0 270 > th dose independent rect. 9 1
957 20.25 wind 1.0 270 > th dose dependent rect. 12 6
984 20.27 atmosphere 995.0 270 > th dose independent rect. 6 7
985 20.27 atmosphere 1015.0 270 < th dose independent rect. 6 7
994 20.27 precipitation 0.1 270 < th dose independent rect. 11 21