BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0600700 Os11g0600700|AK071098
(278 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289 230 5e-61
AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308 217 6e-57
AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266 187 5e-48
AT2G02960.5 | chr2:862440-863980 REVERSE LENGTH=276 172 2e-43
AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260 127 9e-30
AT5G38070.1 | chr5:15190254-15191588 FORWARD LENGTH=260 110 1e-24
AT4G02075.1 | chr4:913555-916414 REVERSE LENGTH=219 100 1e-21
AT1G02610.1 | chr1:553181-555854 REVERSE LENGTH=222 89 3e-18
AT4G32670.1 | chr4:15759527-15762847 REVERSE LENGTH=861 59 3e-09
AT4G34100.1 | chr4:16330590-16334864 FORWARD LENGTH=1109 56 2e-08
AT5G60580.2 | chr5:24354298-24356706 FORWARD LENGTH=495 50 1e-06
AT5G03180.2 | chr5:754201-756411 REVERSE LENGTH=467 50 2e-06
AT2G45530.1 | chr2:18756604-18757326 FORWARD LENGTH=241 48 6e-06
>AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289
Length = 288
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 140/219 (63%), Gaps = 10/219 (4%)
Query: 52 PLIQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHG 111
PL+Q+ ECRICQEEDS KNLE PCAC+GSLKYAHR CVQRWCNEKGDITCEICH+ Y+HG
Sbjct: 62 PLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQHG 121
Query: 112 YTAPPRVEPDDTIIDIGGDWAR-------DPRIIAVAAAQRRLLETEYDEYAGTDASGAA 164
YTAPP PD+TII IG DW DPRI+A+AAA+R LE +YDEY+ ++SGAA
Sbjct: 122 YTAPPPPPPDETIIHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSSGAA 181
Query: 165 FCRSXXXXXXXXXXXXXXXSISDNEGD-DDASTMFSLFLLRAAGFLLPCYIMAWIFSILH 223
FCRS +++ N D DD + FSLFLLRAAGFLLPCYIMAW IL
Sbjct: 182 FCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIGILQ 241
Query: 224 XXXXXXXXXXXXXXXXXFILQSA--QGHALQFTIAPDSP 260
F++ Q L F +AP P
Sbjct: 242 RRRQRQEAAALAAAEVTFMIHGGGPQRRGLHFAVAPQPP 280
>AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308
Length = 307
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 140/223 (62%), Gaps = 16/223 (7%)
Query: 52 PLIQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHG 111
PLIQ+ ECRICQEEDS+KNLE PC+CSGSLKYAHR CVQRWCNEKGD TCEICH+ Y+ G
Sbjct: 71 PLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEICHKSYQPG 130
Query: 112 YTAPPRVEPDDTIIDIGGDWA-------RDPRIIAVAAAQRRLLETEYDEYAGTDASGAA 164
YTAPP DDTIIDIG DW DPRI+A+AAA+R + +YDEYA +++SGAA
Sbjct: 131 YTAPPPPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERHFFDADYDEYADSNSSGAA 190
Query: 165 FCRSXXXXXXXXXXXXXXXSISDNEGD---DDASTMFSLFLLRAAGFLLPCYIMAWIFSI 221
FCRS ++++N D DD S F LF+LRAAGFLLPCYIMAW SI
Sbjct: 191 FCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLPCYIMAWAISI 250
Query: 222 LHXXXXXXXXXXXXXXXXXFILQS------AQGHALQFTIAPD 258
L F+L S + L F + P+
Sbjct: 251 LQRRRQRQEAAALAAAEVAFMLHSGGGGGGQRRGGLHFAVPPE 293
>AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266
Length = 265
Score = 187 bits (475), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 125/180 (69%), Gaps = 9/180 (5%)
Query: 53 LIQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGY 112
LI +AECRICQ+E IKNLE PCAC+GSLKYAHR CVQRWCNEKG+ CEICH+ Y+ GY
Sbjct: 51 LISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTICEICHQPYQAGY 110
Query: 113 TA-PPRVEPDDTIIDIGGDW------ARDPRIIAVAAAQRRLLETEYDEYAGTDASGAAF 165
T+ PP + ++T IDIGG W DPR++A+A A+R++LE+EYD+Y +D SGAAF
Sbjct: 111 TSPPPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDTSGAAF 170
Query: 166 CRSXXXXXXXXXXXXXXXSI--SDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWIFSILH 223
RS +I + DDD S++ SLFLLRAA FLLPCYIMA SILH
Sbjct: 171 FRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASAISILH 230
>AT2G02960.5 | chr2:862440-863980 REVERSE LENGTH=276
Length = 275
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 96/124 (77%), Gaps = 7/124 (5%)
Query: 52 PLIQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHG 111
PLI + ECRIC +E ++NLE PCACSGSLKYAHR CVQRWCNEKG+I CEICH+ Y+ G
Sbjct: 36 PLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPG 95
Query: 112 YTA-PPRVEPDDTIIDIGGDWA------RDPRIIAVAAAQRRLLETEYDEYAGTDASGAA 164
YTA PP ++P++T IDIGG W DPR++A+A A+RR LE+EY EY + ASGAA
Sbjct: 96 YTAPPPPLQPEETTIDIGGGWTISGLDVHDPRLLAIAEAERRYLESEYVEYTASSASGAA 155
Query: 165 FCRS 168
FCRS
Sbjct: 156 FCRS 159
>AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260
Length = 259
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Query: 54 IQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGYT 113
+ AECRIC +ED N+E PC+CSGS+KYAHR CVQRWCNEKGD TCEICH+++K YT
Sbjct: 54 LSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYT 113
Query: 114 A-PPRVEPDDTIIDIGGDWA---RDPRIIAVAAAQRRLLETEYDEYAGTDASGAAFCRSX 169
A PP +E + G+W R+ R I V A ++ Y + + CRS
Sbjct: 114 APPPLLELGHVPLHFRGNWGISQREHRFITVVPADSTFID---QPYPLSSTTSFICCRSL 170
Query: 170 XXXXXXXXXXXXXXSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMA 216
+ + +F+L LR G +LP Y++
Sbjct: 171 VLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVT 217
>AT5G38070.1 | chr5:15190254-15191588 FORWARD LENGTH=260
Length = 259
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 55 QAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGYTA 114
+ +CRIC +ED N++ PC+CSG+LK+AH CVQRWCNEKGD CEIC +QYK GYTA
Sbjct: 50 KFVQCRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTA 109
Query: 115 PPRVEPDDTI-IDIGGDWA------RDPRIIAVAAAQRRLLETEYDEYAGTDASGAAFCR 167
P ++ I ++ G DW R+P + A + ++D Y+ + CR
Sbjct: 110 PRQLFHYTGISMNFGSDWGIEGLDLRNPYFLTWGDA-----DDDHDLYSFHSPTSLICCR 164
Query: 168 SXXXXXXXXXXXXXXXSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWIFSILH 223
+ DD + T+ L L+R G LL Y+ F ++
Sbjct: 165 LIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQ 220
>AT4G02075.1 | chr4:913555-916414 REVERSE LENGTH=219
Length = 218
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 54 IQAAECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGYT 113
++ CRIC EE+ E PCACSG++K+AHR C+QRWCNEKG+ TCEIC + YK GYT
Sbjct: 15 VRITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQVYKDGYT 74
Query: 114 APPR----VEPDDTIIDIGGDWARDPRIIAVAAAQRRLLETEYDEYAGTDASGAAFCRSX 169
A + +E + TI G R R++++A E++ + GA+FCRS
Sbjct: 75 AVLKQSKLIEQEVTIRVNGRRRRRSRRLVSIA-------ESDISQCNSVADRGASFCRSL 127
Query: 170 XXXXXXXXXXXXXXSISDNEGDDDASTMFSLFLLRAAGFLLPCYIMAWIFSILH 223
+ ++ ++F++ L+A G LLP +I+ S +
Sbjct: 128 TFTLSVFLLMKHTFDVIYG-TEEYPFSVFTVLTLKAIGILLPMFIIIRTISTIQ 180
>AT1G02610.1 | chr1:553181-555854 REVERSE LENGTH=222
Length = 221
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 59 CRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGYTA---P 115
CRIC EE++ E PC+CSG++K+AHR C+QRWC+EKG+ CEIC ++YK GYT P
Sbjct: 20 CRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYKPGYTTTSKP 79
Query: 116 PR-VEPDDTIIDIGGDWARDPRIIAVAAAQRRLLETEYDEYAGTDASGAAFCRSXXXXXX 174
R +E TI D R+ E+++ E GA+ CR
Sbjct: 80 SRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESDFQECNSGVDRGASCCRYLALIFS 139
Query: 175 XXXXXXXXXSISDNEGDDDASTMFSLFLLRAAGFLLPCYIM 215
+ ++ T+F++ L+A G LLP ++
Sbjct: 140 VILLIKHAFD-AVYGTEEYPYTIFTVLTLKAIGILLPMLVI 179
>AT4G32670.1 | chr4:15759527-15762847 REVERSE LENGTH=861
Length = 860
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 59 CRICQEEDSIKN-LEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYK----HGYT 113
CRICQ + N L PCAC GSLKY H C+ W N + CEIC Y +
Sbjct: 33 CRICQSPEEPDNPLRHPCACRGSLKYIHSDCLFLWLNRRKRNHCEICKRSYSIVPVYSEN 92
Query: 114 APPRV 118
AP R+
Sbjct: 93 APERL 97
>AT4G34100.1 | chr4:16330590-16334864 FORWARD LENGTH=1109
Length = 1108
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 59 CRICQEEDSIKN-LEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGYTAPP 116
CRIC+ N L PCACSGS+K+ H+ C+ +W N CE+C KH ++ P
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVC----KHPFSFSP 122
>AT5G60580.2 | chr5:24354298-24356706 FORWARD LENGTH=495
Length = 494
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 57 AECRICQEE--DSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKH 110
A CRIC E + + L+ C+C G L AH+ C +W KG+ TCE+C ++ K+
Sbjct: 255 AVCRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKN 310
>AT5G03180.2 | chr5:754201-756411 REVERSE LENGTH=467
Length = 466
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 55 QAAECRICQ---EEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHG 111
+ A CRIC EED + + C C G L AH+ C +W KG+ITC++C ++ ++
Sbjct: 247 EEAVCRICMVEMEEDE-EAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNL 305
Query: 112 YTAPPRVE 119
RV+
Sbjct: 306 PVTLLRVQ 313
>AT2G45530.1 | chr2:18756604-18757326 FORWARD LENGTH=241
Length = 240
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 58 ECRICQEEDSIKNLEKPCACSGSLKYAHRACVQRWCNEKGDITCEICHEQYKHGYTAPPR 117
+CR+C ++ +E C C G L AHR+C+ W KG CEIC Q PP
Sbjct: 73 QCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEIC--QVVAVNVTPPE 130
Query: 118 VEP 120
+P
Sbjct: 131 TQP 133
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,751,677
Number of extensions: 162423
Number of successful extensions: 377
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 366
Number of HSP's successfully gapped: 15
Length of query: 278
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 181
Effective length of database: 8,447,217
Effective search space: 1528946277
Effective search space used: 1528946277
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)