Os11g0592200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chitin-binding allergen Bra r 2 (Fragments).
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Os11g0592200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chitin-binding allergen Bra r 2 (Fragments).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 577.52 | 1.13 | 8.37 | -0.669 | 0.827 | -3.81 | 0.431 | -13.8 | 1.53 | 23.5 | 0.8501 | 4320 | 18.1 | 11.2 |
| 674.93 | 1.21 | 8.36 | -2.56 | 1.11 | -3.25 | 0.665 | -- | 1.31 | 23 | 3.766 | 4325 | 17.5 | 12.2 |
| 572.83 | 1.11 | 8.38 | -0.559 | 0.676 | -3.76 | -- | -13.8 | 1.45 | 23.5 | 0.4454 | 4313 | 18.1 | 11.1 |
| 674.88 | 1.21 | 8.36 | -2.61 | 1.1 | -3.26 | -- | -- | 1.31 | 23 | 3.617 | 4325 | 17.5 | 12.2 |
| 592.89 | 1.13 | 8.35 | -0.523 | -- | -3.9 | -- | -13.6 | 1.48 | -- | 0.5027 | 4300 | 18.1 | 11.2 |
| 923.01 | 1.42 | 8.17 | -3.93 | 0.948 | -- | 0.534 | -- | 1.43 | 0.266 | -- | -- | -- | -- |
| 924.23 | 1.42 | 8.17 | -3.95 | 0.946 | -- | -- | -- | 1.43 | 0.338 | -- | -- | -- | -- |
| 657.15 | 1.19 | 8.36 | -2.58 | -- | -3.31 | -- | -- | 1.28 | -- | 4.288 | 7157 | 17.5 | 12.2 |
| 794.77 | 1.31 | 8.36 | -- | 1.1 | -3.24 | -- | -- | 1.33 | 23 | 5.001 | 5764 | 17.5 | 12.2 |
| 980.52 | 1.46 | 8.15 | -3.92 | -- | -- | -- | -- | 1.44 | -- | -- | -- | -- | -- |
| 1335.56 | 1.71 | 8.07 | -- | 0.892 | -- | -- | -- | 1.87 | 0.106 | -- | -- | -- | -- |
| 722.99 | 1.25 | 8.37 | -- | -- | -4.47 | -- | -- | 1.08 | -- | 5.74 | 7180 | 17.6 | 11.7 |
| 1385.62 | 1.74 | 8.05 | -- | -- | -- | -- | -- | 1.88 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 557.57 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 16 | 564.91 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 20 | 565.26 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 45 | 572.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 46 | 574.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 63 | 578.54 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 69 | 578.95 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 92 | 579.30 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 118 | 582.29 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 122 | 582.43 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 124 | 582.45 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 128 | 582.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 141 | 584.43 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 142 | 584.57 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 147 | 585.87 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 174 | 589.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 187 | 589.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 227 | 590.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 245 | 591.78 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 250 | 592.01 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 269 | 592.51 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 281 | 592.89 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 282 | 592.93 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 287 | 593.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 288 | 593.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 292 | 593.50 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 294 | 593.62 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 299 | 593.78 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 303 | 593.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 324 | 595.30 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 349 | 596.16 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 360 | 596.34 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 361 | 596.35 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 363 | 596.38 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 385 | 596.82 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 442 | 598.65 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 445 | 598.73 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 533 | 601.26 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 554 | 601.80 | radiation | 10.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 555 | 601.96 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 578 | 602.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 610 | 603.56 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 664 | 604.87 | radiation | 1.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 674 | 604.98 | radiation | 1.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 729 | 606.37 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 19 | NA |
| 779 | 607.04 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 817 | 607.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 838 | 608.01 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 844 | 608.14 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 899 | 608.63 | wind | 3.0 | 43200 | > th | dose dependent | sin | 5 | NA |