Os11g0581700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0581700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.68 | 0.292 | 2.89 | -0.433 | 0.0304 | 0.671 | 0.00925 | -5.48 | -0.0128 | 4.57 | 30.8 | 25 | -- | -- |
| 41.42 | 0.302 | 2.86 | -0.0937 | 0.037 | 0.136 | 0.0664 | -- | -0.0147 | 5.24 | 30.8 | 25 | -- | -- |
| 38.64 | 0.292 | 2.89 | -0.422 | 0.0296 | 0.675 | -- | -5.53 | -0.0131 | 4.42 | 30.8 | 25 | -- | -- |
| 41.43 | 0.302 | 2.86 | -0.0935 | 0.037 | 0.133 | -- | -- | -0.0152 | 5.18 | 30.75 | 22 | -- | -- |
| 38.68 | 0.291 | 2.89 | -0.421 | -- | 0.666 | -- | -5.55 | -0.0131 | -- | 30.8 | 25 | -- | -- |
| 41.87 | 0.303 | 2.86 | -0.0823 | 0.0172 | -- | 0.0254 | -- | -0.0241 | 7.85 | -- | -- | -- | -- |
| 41.87 | 0.303 | 2.86 | -0.0816 | 0.0172 | -- | -- | -- | -0.0241 | 7.76 | -- | -- | -- | -- |
| 41.5 | 0.301 | 2.86 | -0.0911 | -- | 0.12 | -- | -- | -0.0152 | -- | 30.75 | 20 | -- | -- |
| 41.66 | 0.302 | 2.85 | -- | 0.0338 | 0.124 | -- | -- | -0.00543 | 5.36 | 30.78 | 20 | -- | -- |
| 41.88 | 0.302 | 2.86 | -0.0814 | -- | -- | -- | -- | -0.0239 | -- | -- | -- | -- | -- |
| 42.04 | 0.303 | 2.86 | -- | 0.0167 | -- | -- | -- | -0.015 | 8.1 | -- | -- | -- | -- |
| 41.72 | 0.302 | 2.86 | -- | -- | 0.113 | -- | -- | -0.00565 | -- | 30.76 | 20 | -- | -- |
| 42.06 | 0.303 | 2.86 | -- | -- | -- | -- | -- | -0.0148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.36 | temperature | 30 | 10 | > th | dose independent | rect. | 11 | 1 |
| 2 | 38.36 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 1 |
| 4 | 38.38 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 10 | 38.49 | humidity | 90 | 90 | > th | dose dependent | rect. | 20 | 1 |
| 133 | 38.88 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 139 | 38.94 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 20 | 1 |
| 167 | 39.03 | temperature | 30 | 30 | > th | dose independent | sin | 7 | NA |
| 252 | 39.30 | humidity | 90 | 4320 | < th | dose independent | rect. | 2 | 2 |
| 270 | 39.35 | humidity | 90 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 271 | 39.36 | temperature | 30 | 30 | < th | dose independent | rect. | 22 | 22 |
| 314 | 39.51 | temperature | 30 | 30 | < th | dose independent | sin | 7 | NA |
| 315 | 39.51 | wind | 3 | 30 | > th | dose independent | rect. | 20 | 3 |
| 316 | 39.51 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 4 |
| 369 | 39.63 | humidity | 60 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 402 | 39.69 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 407 | 39.70 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 412 | 39.71 | humidity | 90 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 424 | 39.72 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 427 | 39.72 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 553 | 39.72 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 556 | 39.72 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 569 | 39.72 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 3 |
| 701 | 39.73 | humidity | 70 | 720 | > th | dose independent | rect. | 7 | 2 |
| 702 | 39.73 | humidity | 90 | 4320 | > th | dose independent | rect. | 1 | 4 |
| 707 | 39.73 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 713 | 39.73 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 726 | 39.74 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 748 | 39.75 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 841 | 39.79 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 914 | 39.80 | humidity | 90 | 4320 | < th | dose dependent | rect. | 24 | 2 |