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Os11g0568700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0188) R2 : 0.588
β1 : -1.21 (0.0687) R2dD : 0.293 R2D : 0.302
β2 : 0.783 (0.0465) R2dC : 0.257 R2C : 0.242
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.18 (0.0401) R2dN8 : 0.0244 R2N8 : 0.0507
σ : 0.353
deviance : 56.78
__
_____
C
peak time of C : 2.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.67 0.296 10.5 -1.13 0.51 -0.666 -1.07 -0.217 0.187 6.83 12.58 14 -- --
39.9 0.294 10.5 -1.12 0.502 -0.675 -1.09 -- 0.186 7 12.58 13 -- --
42.39 0.303 10.5 -1.15 0.514 -0.624 -- -0.374 0.194 6.34 12.65 13 -- --
43.25 0.306 10.5 -1.16 0.504 -0.622 -- -- 0.191 6.3 12.58 13 -- --
49.49 0.328 10.5 -1.16 -- -0.743 -- -0.429 0.238 -- 10.83 186 -- --
56.57 0.353 10.5 -1.21 0.779 -- 0.266 -- 0.182 2.78 -- -- -- --
56.78 0.353 10.5 -1.21 0.783 -- -- -- 0.18 2.9 -- -- -- --
49.95 0.329 10.5 -1.1 -- -0.758 -- -- 0.245 -- 10.82 212 -- --
78.62 0.413 10.4 -- 0.525 -0.675 -- -- 0.296 6.39 13.92 15 -- --
92.11 0.448 10.5 -1.18 -- -- -- -- 0.2 -- -- -- -- --
95.62 0.457 10.4 -- 0.759 -- -- -- 0.315 2.89 -- -- -- --
81.1 0.419 10.4 -- -- -0.799 -- -- 0.391 -- 10.78 226 -- --
128.87 0.53 10.4 -- -- -- -- -- 0.331 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.95 radiation 30.0 270 < th dose independent rect. 13 18
2 36.06 radiation 40.0 90 < th dose dependent rect. 13 19
8 36.32 precipitation 0.1 270 < th dose independent rect. 7 19
9 36.32 precipitation 0.1 270 < th dose dependent rect. 7 19
12 36.40 radiation 40.0 90 < th dose dependent rect. 15 17
16 36.64 radiation 20.0 270 < th dose dependent rect. 2 15
18 36.67 humidity 50.0 270 > th dose independent rect. 14 17
21 36.71 wind 9.0 270 < th dose independent rect. 7 19
23 36.78 atmosphere 995.0 270 > th dose independent rect. 14 17
24 36.81 wind 9.0 270 < th dose independent rect. 6 9
27 36.83 radiation 30.0 90 < th dose dependent rect. 13 22
28 36.89 wind 9.0 270 < th dose independent rect. 7 7
30 36.90 radiation 1.0 270 > th dose independent rect. 6 8
32 36.94 precipitation 0.1 270 < th dose independent rect. 6 9
33 36.94 precipitation 0.1 270 < th dose dependent rect. 6 9
45 37.06 precipitation 0.1 270 < th dose independent rect. 7 7
46 37.06 precipitation 0.1 270 < th dose dependent rect. 7 7
50 37.10 wind 9.0 270 < th dose independent rect. 2 5
51 37.10 temperature 10.0 270 > th dose independent rect. 2 5
53 37.10 temperature 30.0 270 < th dose independent rect. 2 5
54 37.10 humidity 50.0 270 > th dose independent rect. 2 5
56 37.10 atmosphere 995.0 270 > th dose independent rect. 2 5
57 37.10 atmosphere 1015.0 270 < th dose independent rect. 2 5
58 37.10 radiation 40.0 270 < th dose independent rect. 2 5
59 37.10 temperature 10.0 270 > th dose independent rect. 6 9
60 37.10 atmosphere 1015.0 270 < th dose independent rect. 6 9
61 37.10 temperature 10.0 270 > th dose independent rect. 15 15
62 37.10 temperature 10.0 270 > th dose independent rect. 7 19
73 37.17 temperature 10.0 270 > th dose independent rect. 7 7
74 37.17 atmosphere 995.0 270 > th dose independent rect. 7 7
75 37.17 atmosphere 1015.0 270 < th dose independent rect. 7 7
76 37.17 temperature 10.0 270 > th dose independent rect. 14 17
79 37.18 precipitation 0.1 270 < th dose independent rect. 6 21
80 37.18 radiation 40.0 270 < th dose dependent rect. 2 5
82 37.18 precipitation 0.1 270 < th dose dependent rect. 6 21
101 37.28 radiation 20.0 270 < th dose dependent rect. 2 13
116 37.39 precipitation 0.1 270 < th dose independent rect. 2 5
117 37.39 precipitation 0.1 270 < th dose dependent rect. 2 5
144 37.52 wind 1.0 270 > th dose independent rect. 7 7
147 37.55 wind 9.0 270 < th dose independent rect. 14 17
160 37.60 wind 9.0 270 < th dose independent rect. 15 15
173 37.69 radiation 1.0 10 > th dose independent rect. 8 8
202 37.80 wind 9.0 270 < th dose independent rect. 6 21
206 37.83 humidity 50.0 270 > th dose dependent rect. 2 5
243 38.02 humidity 50.0 30 > th dose independent rect. 16 16
244 38.03 atmosphere 995.0 270 > th dose dependent rect. 2 5
266 38.15 radiation 10.0 90 > th dose independent sin 0 NA
268 38.16 wind 9.0 270 < th dose independent rect. 3 3
269 38.16 temperature 10.0 270 > th dose independent rect. 3 3
271 38.16 temperature 30.0 270 < th dose independent rect. 3 3
272 38.16 humidity 50.0 270 > th dose independent rect. 3 3
275 38.16 atmosphere 995.0 270 > th dose independent rect. 3 3
276 38.16 atmosphere 1015.0 270 < th dose independent rect. 3 3
277 38.16 radiation 20.0 270 < th dose independent rect. 3 3
280 38.16 temperature 10.0 270 > th dose independent rect. 6 21
313 38.31 wind 9.0 270 < th dose dependent rect. 2 5
318 38.33 radiation 40.0 270 < th dose dependent rect. 3 3
332 38.38 radiation 30.0 90 < th dose dependent rect. 4 15
344 38.43 radiation 10.0 270 > th dose independent rect. 17 21
345 38.43 temperature 10.0 270 > th dose dependent rect. 7 7
348 38.44 radiation 20.0 90 < th dose independent rect. 13 22
355 38.48 radiation 10.0 10 > th dose independent sin 22 NA
369 38.49 humidity 50.0 270 > th dose independent rect. 7 7
372 38.51 precipitation 0.1 270 < th dose independent rect. 3 3
374 38.51 precipitation 0.1 270 < th dose dependent rect. 3 3
376 38.51 temperature 10.0 10 > th dose dependent rect. 8 8
412 38.62 wind 9.0 10 < th dose independent rect. 8 8
414 38.63 atmosphere 995.0 10 > th dose independent rect. 16 16
418 38.64 wind 1.0 270 > th dose independent rect. 7 19
440 38.71 humidity 50.0 270 > th dose dependent rect. 3 3
444 38.74 temperature 10.0 10 > th dose independent rect. 8 8
446 38.74 atmosphere 1015.0 10 < th dose independent rect. 8 8
447 38.74 precipitation 0.1 10 < th dose independent rect. 8 8
448 38.74 temperature 10.0 10 > th dose independent rect. 16 16
449 38.74 precipitation 0.1 10 < th dose dependent rect. 8 8
458 38.78 precipitation 0.1 270 < th dose independent rect. 14 17
459 38.78 precipitation 0.1 270 < th dose dependent rect. 14 17
463 38.79 precipitation 0.1 270 < th dose independent rect. 15 15
464 38.79 precipitation 0.1 270 < th dose dependent rect. 15 15
494 38.89 radiation 40.0 10 < th dose independent rect. 16 16
495 38.89 atmosphere 995.0 270 > th dose independent rect. 7 19
496 38.90 radiation 10.0 270 < th dose independent rect. 2 16
509 38.94 radiation 20.0 10 < th dose dependent rect. 5 15
542 39.01 wind 1.0 10 > th dose independent rect. 8 8
561 39.06 radiation 40.0 270 < th dose independent rect. 2 16
567 39.07 radiation 10.0 270 < th dose dependent sin 3 NA
571 39.09 radiation 1.0 270 < th dose independent rect. 3 3
589 39.12 wind 9.0 10 < th dose independent rect. 16 16
610 39.17 precipitation 0.1 270 < th dose independent rect. 18 8
621 39.17 precipitation 0.1 270 < th dose dependent rect. 18 8
630 39.20 radiation 20.0 10 < th dose dependent sin 21 NA
632 39.21 wind 1.0 270 > th dose independent rect. 1 6
636 39.21 wind 9.0 270 < th dose dependent rect. 3 3
662 39.25 temperature 10.0 270 > th dose dependent rect. 2 5
694 39.33 radiation 20.0 90 < th dose independent rect. 4 16
736 39.42 atmosphere 995.0 270 > th dose independent rect. 2 17
741 39.45 wind 7.0 270 < th dose independent rect. 19 7
761 39.50 radiation 1.0 270 < th dose independent rect. 18 8
764 39.52 temperature 10.0 270 > th dose independent rect. 19 7
765 39.52 temperature 30.0 270 < th dose independent rect. 19 7
766 39.52 humidity 50.0 270 > th dose independent rect. 19 7
767 39.52 atmosphere 995.0 270 > th dose independent rect. 19 7
773 39.52 temperature 10.0 270 > th dose independent rect. 2 17
774 39.52 atmosphere 1015.0 270 < th dose independent rect. 2 17
776 39.52 radiation 1.0 270 < th dose dependent rect. 19 7
811 39.56 atmosphere 1015.0 270 < th dose independent rect. 14 17
812 39.56 atmosphere 1015.0 270 < th dose independent rect. 7 18
852 39.62 temperature 10.0 1440 > th dose independent rect. 9 8
856 39.62 temperature 10.0 1440 > th dose independent rect. 17 16
888 39.72 radiation 10.0 270 > th dose independent sin 4 NA
922 39.74 humidity 50.0 1440 > th dose independent rect. 18 15
926 39.75 atmosphere 995.0 10 > th dose independent rect. 8 8
974 39.85 temperature 10.0 270 > th dose dependent rect. 3 3
975 39.85 wind 9.0 270 < th dose dependent rect. 7 7
984 39.89 radiation 1.0 270 < th dose independent rect. 3 11