Os11g0550900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0550900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.7 | 0.535 | 6.69 | -1.07 | 1 | -3.05 | -1 | 2.24 | -0.0577 | 2.42 | 29.88 | 263 | -- | -- |
| 134.1 | 0.539 | 6.64 | -0.68 | 0.984 | -3.03 | -0.584 | -- | 0.0355 | 2.31 | 29.4 | 258 | -- | -- |
| 132.74 | 0.537 | 6.67 | -0.914 | 0.989 | -3.03 | -- | 1.62 | -0.00595 | 2.25 | 29.8 | 261 | -- | -- |
| 134.95 | 0.541 | 6.64 | -0.661 | 1.01 | -3.04 | -- | -- | 0.0397 | 2.23 | 29.39 | 254 | -- | -- |
| 143.59 | 0.558 | 6.68 | -1.01 | -- | -2.75 | -- | 1.57 | -0.0366 | -- | 27.06 | 857 | -- | -- |
| 259.76 | 0.756 | 6.51 | 0.11 | 0.536 | -- | -0.0864 | -- | 0.665 | 21.9 | -- | -- | -- | -- |
| 259.78 | 0.755 | 6.51 | 0.114 | 0.537 | -- | -- | -- | 0.666 | 21.8 | -- | -- | -- | -- |
| 145.93 | 0.563 | 6.63 | -0.696 | -- | -2.86 | -- | -- | 0.0668 | -- | 25.55 | 842 | -- | -- |
| 145.17 | 0.561 | 6.62 | -- | 0.939 | -2.78 | -- | -- | 0.166 | 2 | 29.5 | 250 | -- | -- |
| 277.01 | 0.778 | 6.5 | 0.119 | -- | -- | -- | -- | 0.665 | -- | -- | -- | -- | -- |
| 260.12 | 0.754 | 6.51 | -- | 0.537 | -- | -- | -- | 0.653 | 21.8 | -- | -- | -- | -- |
| 156.74 | 0.583 | 6.6 | -- | -- | -2.56 | -- | -- | 0.179 | -- | 25.76 | 652 | -- | -- |
| 277.38 | 0.777 | 6.5 | -- | -- | -- | -- | -- | 0.652 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.44 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 3 | 126.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 13 | 128.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 17 | 129.74 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 22 | 131.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 29 | 132.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 36 | 133.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 42 | 134.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 44 | 134.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 45 | 134.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 47 | 135.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 62 | 135.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 15 |
| 77 | 135.53 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 115 | 136.18 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 121 | 136.29 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 158 | 136.67 | temperature | 15 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 336 | 138.55 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 337 | 138.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 366 | 138.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 394 | 139.03 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 427 | 139.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 460 | 139.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 489 | 139.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 513 | 139.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 581 | 140.36 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 591 | 140.41 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 692 | 141.03 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 738 | 141.26 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 740 | 141.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 771 | 141.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 868 | 141.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 871 | 141.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 883 | 142.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 939 | 142.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |