Os11g0525800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADL308Cp.
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Os11g0525800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADL308Cp.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.51 | 0.303 | 9.71 | -0.468 | 0.115 | -0.956 | -0.0405 | 0.135 | -0.055 | 2.35 | 28.16 | 9 | -- | -- |
| 41.39 | 0.3 | 9.71 | -0.448 | 0.0925 | -0.962 | -0.0116 | -- | -0.0576 | 2.31 | 27.2 | 17 | -- | -- |
| 41.4 | 0.3 | 9.71 | -0.443 | 0.0978 | -0.956 | -- | -0.00981 | -0.0514 | 2.04 | 27.24 | 14 | -- | -- |
| 41.39 | 0.3 | 9.71 | -0.444 | 0.0918 | -0.96 | -- | -- | -0.057 | 2.34 | 27.2 | 17 | -- | -- |
| 41.71 | 0.301 | 9.7 | -0.418 | -- | -0.893 | -- | -0.0376 | -0.0397 | -- | 26.55 | 19 | -- | -- |
| 54.56 | 0.346 | 9.66 | -0.215 | 0.189 | -- | 0.0781 | -- | 0.155 | 14 | -- | -- | -- | -- |
| 54.58 | 0.346 | 9.66 | -0.212 | 0.188 | -- | -- | -- | 0.155 | 13.9 | -- | -- | -- | -- |
| 41.72 | 0.301 | 9.71 | -0.424 | -- | -0.891 | -- | -- | -0.0412 | -- | 26.57 | 19 | -- | -- |
| 46.09 | 0.316 | 9.69 | -- | 0.0299 | -0.781 | -- | -- | 0.0275 | 3.32 | 27.09 | 17 | -- | -- |
| 56.72 | 0.352 | 9.66 | -0.22 | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
| 55.77 | 0.349 | 9.65 | -- | 0.192 | -- | -- | -- | 0.179 | 14 | -- | -- | -- | -- |
| 46.12 | 0.316 | 9.69 | -- | -- | -0.76 | -- | -- | 0.031 | -- | 27 | 13 | -- | -- |
| 58 | 0.355 | 9.66 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 6 | 40.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 11 | 41.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 23 | 41.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 24 | 41.57 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 30 | 41.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 32 | 41.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 34 | 41.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 37 | 41.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 42 | 41.89 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 46 | 41.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 47 | 41.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 48 | 41.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 53 | 42.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 58 | 42.08 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 65 | 42.15 | temperature | 30 | 90 | < th | dose dependent | rect. | 14 | 21 |
| 85 | 42.26 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 89 | 42.28 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 96 | 42.30 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 112 | 42.40 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 130 | 42.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 155 | 42.61 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 256 | 43.08 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 265 | 43.12 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 268 | 43.13 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 289 | 43.17 | temperature | 10 | 90 | > th | dose dependent | sin | 8 | NA |
| 365 | 43.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 402 | 43.51 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 413 | 43.54 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 453 | 43.68 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 462 | 43.71 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 487 | 43.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 561 | 43.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 622 | 44.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 728 | 44.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 742 | 44.32 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 745 | 44.32 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 764 | 44.37 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 769 | 44.39 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 793 | 44.42 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 22 | 14 |
| 799 | 44.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 805 | 44.43 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 820 | 44.44 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 837 | 44.46 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 20 |
| 865 | 44.49 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 880 | 44.51 | atmosphere | 1005 | 43200 | < th | dose independent | sin | 8 | NA |
| 892 | 44.52 | atmosphere | 1005 | 43200 | > th | dose independent | sin | 7 | NA |
| 925 | 44.54 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 22 |
| 933 | 44.55 | wind | 9 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 944 | 44.56 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 964 | 44.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 970 | 44.58 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 10 |