Os11g0503400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os11g0503400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.53 | 0.359 | 7.58 | 0.885 | 0.00325 | -1.88 | 0.52 | -2.73 | 0.413 | 13.1 | 21.2 | 5459 | -- | -- |
| 60.77 | 0.363 | 7.66 | 0.835 | 0.0095 | -0.857 | 0.482 | -- | 0.367 | 13.3 | 23.57 | 5283 | -- | -- |
| 59.49 | 0.359 | 7.57 | 0.926 | 0.059 | -1.81 | -- | -2.54 | 0.422 | 19.9 | 21.12 | 5535 | -- | -- |
| 60.73 | 0.363 | 7.66 | 0.918 | 0.059 | -0.798 | -- | -- | 0.37 | 19.2 | 24.9 | 3141 | -- | -- |
| 59.54 | 0.359 | 7.56 | 0.88 | -- | -2.42 | -- | -3.82 | 0.433 | -- | 20.12 | 5671 | -- | -- |
| 70.1 | 0.393 | 7.61 | 1.27 | 0.0275 | -- | -0.507 | -- | 0.578 | 0.969 | -- | -- | -- | -- |
| 70.98 | 0.395 | 7.61 | 1.29 | 0.0668 | -- | -- | -- | 0.582 | 20.5 | -- | -- | -- | -- |
| 60.93 | 0.364 | 7.66 | 0.932 | -- | -0.802 | -- | -- | 0.376 | -- | 25.28 | 3316 | -- | -- |
| 62.15 | 0.367 | 7.72 | -- | 0.0626 | -1.17 | -- | -- | 0.0886 | 19 | 53.61 | 47520 | -- | -- |
| 71.23 | 0.394 | 7.61 | 1.29 | -- | -- | -- | -- | 0.581 | -- | -- | -- | -- | -- |
| 115.01 | 0.502 | 7.65 | -- | 0.0665 | -- | -- | -- | 0.438 | 22 | -- | -- | -- | -- |
| 62.36 | 0.368 | 7.72 | -- | -- | -1.17 | -- | -- | 0.0879 | -- | 52.22 | 47520 | -- | -- |
| 115.28 | 0.501 | 7.64 | -- | -- | -- | -- | -- | 0.438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.34 | humidity | 60 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 30 | 57.46 | humidity | 50 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 37 | 57.46 | radiation | 20 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 40 | 57.46 | humidity | 50 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 44 | 57.47 | humidity | 60 | 43200 | > th | dose dependent | sin | 14 | NA |
| 100 | 57.51 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 105 | 57.51 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 12 |
| 121 | 57.53 | humidity | 50 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 127 | 57.53 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 8 |
| 138 | 57.54 | radiation | 1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 164 | 57.55 | radiation | 20 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 178 | 57.56 | radiation | 20 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 200 | 57.57 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 280 | 57.61 | humidity | 90 | 43200 | < th | dose dependent | rect. | 16 | 15 |
| 283 | 57.62 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 314 | 57.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 318 | 57.64 | humidity | 70 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 338 | 57.65 | humidity | 70 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 369 | 57.66 | humidity | 90 | 43200 | < th | dose dependent | sin | 14 | NA |
| 409 | 57.68 | humidity | 70 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 442 | 57.70 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 9 |
| 546 | 57.75 | humidity | 70 | 43200 | > th | dose independent | sin | 16 | NA |
| 554 | 57.75 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 561 | 57.76 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 578 | 57.77 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 579 | 57.77 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 605 | 57.78 | humidity | 90 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 631 | 57.79 | humidity | 70 | 43200 | < th | dose independent | sin | 16 | NA |
| 662 | 57.81 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 687 | 57.82 | humidity | 60 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 808 | 57.87 | humidity | 60 | 43200 | > th | dose dependent | no | NA | NA |
| 826 | 57.88 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 845 | 57.88 | humidity | 60 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 849 | 57.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 873 | 57.90 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 890 | 57.90 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 911 | 57.90 | humidity | 60 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 913 | 57.91 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 924 | 57.91 | radiation | 10 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 995 | 57.93 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |