Os11g0482100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein transport protein Sec24-like CEF.
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Os11g0482100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein transport protein Sec24-like CEF.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.73 | 0.229 | 10.7 | 0.317 | 0.399 | 0.765 | -0.0173 | 0.895 | 0.0562 | 6.89 | 9.93 | 252 | -- | -- |
| 24.11 | 0.229 | 10.8 | 0.199 | 0.401 | 0.634 | -0.141 | -- | 0.0258 | 6.98 | 18.8 | 273 | -- | -- |
| 23.73 | 0.227 | 10.7 | 0.318 | 0.398 | 0.765 | -- | 0.905 | 0.0566 | 6.88 | 10.11 | 249 | -- | -- |
| 24.15 | 0.229 | 10.8 | 0.195 | 0.409 | 0.644 | -- | -- | 0.0197 | 6.93 | 18.88 | 269 | -- | -- |
| 28.38 | 0.249 | 10.8 | 0.345 | -- | 0.594 | -- | 0.776 | 0.08 | -- | 10.11 | 249 | -- | -- |
| 30.77 | 0.26 | 10.7 | 0.349 | 0.248 | -- | -0.0117 | -- | 0.131 | 9.01 | -- | -- | -- | -- |
| 30.77 | 0.26 | 10.7 | 0.349 | 0.248 | -- | -- | -- | 0.131 | 9.02 | -- | -- | -- | -- |
| 28.73 | 0.25 | 10.8 | 0.175 | -- | 0.471 | -- | -- | 0.032 | -- | 17.86 | 1477 | -- | -- |
| 25.05 | 0.233 | 10.8 | -- | 0.433 | 0.724 | -- | -- | -0.0125 | 6.79 | 18.59 | 269 | -- | -- |
| 34.3 | 0.274 | 10.7 | 0.348 | -- | -- | -- | -- | 0.132 | -- | -- | -- | -- | -- |
| 33.98 | 0.273 | 10.7 | -- | 0.248 | -- | -- | -- | 0.0917 | 8.92 | -- | -- | -- | -- |
| 29.36 | 0.252 | 10.8 | -- | -- | 0.638 | -- | -- | -0.00265 | -- | 14.5 | 1477 | -- | -- |
| 37.5 | 0.286 | 10.8 | -- | -- | -- | -- | -- | 0.0934 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 2 | 22.55 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 12 | 22.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 16 | 22.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 28 | 22.95 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 34 | 22.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 60 | 23.13 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 107 | 23.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 115 | 23.28 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 178 | 23.44 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 181 | 23.45 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 183 | 23.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 198 | 23.49 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 210 | 23.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 223 | 23.53 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 240 | 23.58 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 267 | 23.64 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 290 | 23.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 291 | 23.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 310 | 23.68 | temperature | 30 | 1440 | > th | dose independent | sin | 5 | NA |
| 311 | 23.68 | temperature | 30 | 1440 | < th | dose independent | sin | 6 | NA |
| 314 | 23.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 351 | 23.73 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 361 | 23.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 364 | 23.74 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 372 | 23.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 386 | 23.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 395 | 23.76 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 402 | 23.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 407 | 23.77 | temperature | 30 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 467 | 23.80 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 469 | 23.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 478 | 23.82 | temperature | 20 | 270 | > th | dose dependent | sin | 0 | NA |
| 488 | 23.83 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 9 |
| 508 | 23.84 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 521 | 23.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 525 | 23.85 | temperature | 30 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 528 | 23.85 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 530 | 23.85 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 542 | 23.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 558 | 23.86 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 629 | 23.88 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 652 | 23.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 662 | 23.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 697 | 23.91 | atmosphere | 1000 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 825 | 23.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 826 | 23.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 853 | 23.99 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 854 | 23.99 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 860 | 23.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 861 | 23.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 863 | 24.00 | temperature | 30 | 4320 | < th | dose independent | sin | 10 | NA |
| 864 | 24.00 | atmosphere | 1000 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 871 | 24.00 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 909 | 24.02 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |