BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0482100 Os11g0482100|AK058672
(577 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G44340.1 | chr3:16011923-16019873 REVERSE LENGTH=1097 741 0.0
AT4G32640.1 | chr4:15742661-15750424 FORWARD LENGTH=1081 712 0.0
AT3G07100.1 | chr3:2245689-2250077 REVERSE LENGTH=1039 238 7e-63
AT2G27460.1 | chr2:11740670-11744867 FORWARD LENGTH=746 64 3e-10
>AT3G44340.1 | chr3:16011923-16019873 REVERSE LENGTH=1097
Length = 1096
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/577 (60%), Positives = 435/577 (75%), Gaps = 1/577 (0%)
Query: 1 NAIQTGXXXXXXXXXXXXXXDLPEGPRTMVGIATFDSAIHFYSLKRAQQQPLMLIVPDVQ 60
NAIQTG DLPEGPRT VGIATFDS IHFY+LKRA QQPLMLIVPDVQ
Sbjct: 519 NAIQTGATAAACSAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQ 578
Query: 61 DVYTPLQKDLILPVSECRENLEQLLESIPSMFENNRVADSAFGAAMKAGFLAMKSTGGKL 120
DVYTPL+ D+I+ +SECR++LE LLESIP+MF+ ++ +SAFGAA+KA FLAMKSTGGKL
Sbjct: 579 DVYTPLETDVIVQLSECRQHLEILLESIPTMFQESKSPESAFGAAVKAAFLAMKSTGGKL 638
Query: 121 LVFQXXXXXXXXXXXXAREAEGRANVSTGDKEPHKLLQPVDKTLKTMALEFAEYQVCVDV 180
+VFQ +REA+GRAN S G+KE HKLLQP DKTL+TMA+EFAEYQVCVD+
Sbjct: 639 MVFQSVLPSVGIGALSSREADGRANASAGEKEAHKLLQPADKTLRTMAIEFAEYQVCVDL 698
Query: 181 FLTTQSYVDIASISVVPNTTGGRVYYYYPFSARSDPAKLFNDLRWNISRPQGFEAVMRVR 240
F+TTQ+YVD+ASIS +P TTGG+VY YYPFSA SDP KL+NDLRWNI+RPQGFEAVMRVR
Sbjct: 699 FITTQAYVDMASISEIPRTTGGQVYCYYPFSALSDPPKLYNDLRWNITRPQGFEAVMRVR 758
Query: 241 CSQGLQVQDYFGNFCKRVPTDIDLPSIDSDKTIMVTFKHDDKLQENSECGFQCALLYTTV 300
CSQG+QVQ+Y GNFCKR+PTDIDLP+ID DK IMVT KHDDKLQ+ +ECGFQCALLYTT+
Sbjct: 759 CSQGIQVQEYSGNFCKRIPTDIDLPAIDCDKAIMVTLKHDDKLQDGAECGFQCALLYTTI 818
Query: 301 YGQRRIRVMNLSLPCTNMLSNLFRYADLETQFTCFLKQAANGIPTSTLLHLREEVTNTCI 360
G+RRIRV+NLS+PCTNMLSNLFR ADL++QF C LKQAAN IP+ L ++E+ TN CI
Sbjct: 819 SGERRIRVLNLSIPCTNMLSNLFRSADLDSQFACMLKQAANEIPSKALPLVKEQATNDCI 878
Query: 361 NILQSYRKYCASVSSSGQXXXXXXXXXXXXXXXXXXXSIGLRNEGRLDDRSYWIXXXXXX 420
IL SYRK+CA+V+S+GQ +GLR +GR+DDRS+WI
Sbjct: 879 TILHSYRKFCATVTSTGQLILPEALKLLPLYTLALTKGVGLRMDGRIDDRSFWINHVSSL 938
Query: 421 XXXXXXXXXFPRLIPIHDLTSRGDDESLIPSPLMLNSENIREDGVYLLENGEDGLIYVGN 480
+PR+I +HDL + ++E+++P P+ L SE++ ++GVY LENGEDGLIY+G
Sbjct: 939 STPLAIPLVYPRMIAVHDLDANDNEENVVPCPIPLQSEHLSDEGVYFLENGEDGLIYIGE 998
Query: 481 VVEPTILEQIFGVSSLAALPSQAVLEQFDNELSRKVNEVINEIXXXXXXXXXXXXXXXGE 540
V IL+++F V S A LPSQ VL+++DN+LS+K N+V+NEI G+
Sbjct: 999 SVNSDILQKLFNVRSAAELPSQYVLQKYDNQLSKKFNDVVNEIRRQRSSYLRIKLCKKGD 1058
Query: 541 PSGD-FFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKM 576
P+G+ F+S++ ED+ GG SYV+FLV VHRQIQ K+
Sbjct: 1059 PAGNMLFQSYMVEDRGSGGASYVDFLVSVHRQIQHKL 1095
>AT4G32640.1 | chr4:15742661-15750424 FORWARD LENGTH=1081
Length = 1080
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/576 (59%), Positives = 422/576 (73%), Gaps = 12/576 (2%)
Query: 1 NAIQTGXXXXXXXXXXXXXXDLPEGPRTMVGIATFDSAIHFYSLKRAQQQPLMLIVPDVQ 60
NAIQTG DLPEGPRT VGIATFDS IHFY+LKRA QQPLMLIVPDVQ
Sbjct: 516 NAIQTGATAAACNAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQ 575
Query: 61 DVYTPLQKDLILPVSECRENLEQLLESIPSMFENNRVADSAFGAAMKAGFLAMKSTGGKL 120
DVYTPL+ D+++ +SECR++LE LL+SIP+MF+ +++ +SAFGAA+KA FLAMKS GGKL
Sbjct: 576 DVYTPLETDVVVQLSECRQHLELLLDSIPTMFQESKIPESAFGAAVKAAFLAMKSKGGKL 635
Query: 121 LVFQXXXXXXXXXXXXAREAEGRANVSTGDKEPHKLLQPVDKTLKTMALEFAEYQVCVDV 180
+VFQ +REAEGRAN+S G+KE HKLLQP DKTLKTMA+EFAEYQVCVD+
Sbjct: 636 MVFQSILCSVGVGALSSREAEGRANMSAGEKEAHKLLQPADKTLKTMAIEFAEYQVCVDI 695
Query: 181 FLTTQSYVDIASISVVPNTTGGRVYYYYPFSARSDPAKLFNDLRWNISRPQGFEAVMRVR 240
F+TTQ+YVD+ASISV+P TTGG+VY YYPFSA SDP KL+NDL+WNI+RPQGFEAVMRVR
Sbjct: 696 FITTQAYVDMASISVIPRTTGGQVYCYYPFSALSDPPKLYNDLKWNITRPQGFEAVMRVR 755
Query: 241 CSQGLQVQDYFGNFCKRVPTDIDLPSIDSDKTIMVTFKHDDKLQENSECGFQCALLYTTV 300
CSQG+QVQ+Y GNFCKR+PTDIDLP+ HDDKLQ+ +EC FQCALLYTT+
Sbjct: 756 CSQGIQVQEYSGNFCKRIPTDIDLPA------------HDDKLQDGAECAFQCALLYTTI 803
Query: 301 YGQRRIRVMNLSLPCTNMLSNLFRYADLETQFTCFLKQAANGIPTSTLLHLREEVTNTCI 360
YG+RRIRV LSL CTNMLSNLFR ADL++QF C LKQAAN IP+ L ++E+ TN+CI
Sbjct: 804 YGERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLKQAANEIPSKALPLVKEQATNSCI 863
Query: 361 NILQSYRKYCASVSSSGQXXXXXXXXXXXXXXXXXXXSIGLRNEGRLDDRSYWIXXXXXX 420
N L +YRK+CA+V+SSGQ S+GLR +GR+DDRS+WI
Sbjct: 864 NALYAYRKFCATVTSSGQLILPEALKLFPLYTLALTKSVGLRTDGRIDDRSFWINYVSSL 923
Query: 421 XXXXXXXXXFPRLIPIHDLTSRGDDESLIPSPLMLNSENIREDGVYLLENGEDGLIYVGN 480
+PR+I +HDL + + S++P P+ L+ E+I +GVY LENGEDGL++VG
Sbjct: 924 STPLAIPLVYPRMISVHDLDVKDTEGSVLPPPIPLSGEHISNEGVYFLENGEDGLLFVGE 983
Query: 481 VVEPTILEQIFGVSSLAALPSQAVLEQFDNELSRKVNEVINEIXXXXXXXXXXXXXXXGE 540
V+ IL+++F VSS A +P+Q VL+Q+DN+LS+K N+ +NEI GE
Sbjct: 984 SVDSDILQKLFAVSSAAEIPNQFVLQQYDNQLSKKFNDAVNEIRRQRCSYLRIKLCKKGE 1043
Query: 541 PSGDFFRSFLTEDKAPGGLSYVEFLVHVHRQIQSKM 576
PSG F S++ ED+ G SYVEFLV VHRQIQ KM
Sbjct: 1044 PSGMLFLSYMVEDRTASGPSYVEFLVQVHRQIQLKM 1079
>AT3G07100.1 | chr3:2245689-2250077 REVERSE LENGTH=1039
Length = 1038
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 160/564 (28%), Positives = 271/564 (48%), Gaps = 15/564 (2%)
Query: 21 DLPEGPRTMVGIATFDSAIHFYSLKRAQQQPLMLIVPDVQDVYTPLQKDLILPVSECREN 80
+LP PRT +G T+DS +HFY++K + QP M++V D+ D++ PL DL++ +SE R
Sbjct: 477 NLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLVNLSESRTV 536
Query: 81 LEQLLESIPSMFENNRVADSAFGAAMKAGFLAMKSTGGKLLVFQXXXXXXXXXXXXAREA 140
++ L+S+P MF++N +SAFG A++A F+ M GGKLL+FQ R
Sbjct: 537 VDAFLDSLPLMFQDNFNVESAFGPALRAAFMVMNQLGGKLLIFQNSLPSLGAGRLKLRGD 596
Query: 141 EGRANVSTGDKEPHKLLQPVDKTLKTMALEFAEYQVCVDVFLTTQSYVDIASISVVPNTT 200
+ R V DKE + L D K MA + ++Q+ ++V+ + Y DIAS+ + T
Sbjct: 597 DPR--VYGTDKE-YALRVAEDPFYKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYT 653
Query: 201 GGRVYYYYPFSARSDPAKLFNDLRWNISRPQGFEAVMRVRCSQGLQVQDYFGNFCKRVPT 260
GG+VYYY F + KL ++L +++R +EAVMR+RC +G++ Y GNF R
Sbjct: 654 GGQVYYYPGFQSSVHGDKLRHELARDLTRETAWEAVMRIRCGKGIRFSSYHGNFMLRSTD 713
Query: 261 DIDLPSIDSDKTIMVTFKHDDKLQENSECGFQCALLYTTVYGQRRIRVMNLSLPCTNMLS 320
+ LP++D DK + ++ L + FQ ALLYT G+RRIRV P L
Sbjct: 714 LLALPAVDCDKAYAMQLSLEETLLTSQTVYFQVALLYTASCGERRIRVHTSVAPVVTDLG 773
Query: 321 NLFRYADLETQFTCFLKQAANGIPTSTLLHLREEVTNTCINILQSYRKYCASVSSSGQXX 380
++R AD + + + + A ++ L R + + L+ YR A G
Sbjct: 774 EMYRQADTGSIVSLYARLAIEKSLSAKLDDARNAIQQKIVKALKEYRNLHAVQHRLGSRL 833
Query: 381 XXXXXXXXXXXXXXXXXS----IGLRNEGRLDDRSYWIXXXXXXXXXXXXXXXFPRLIPI 436
+G + LD+R +P L +
Sbjct: 834 VYPESLKFLPLYGLAITKSTPLLGGPADTSLDERCAAGFTMMALPVKKLLKLLYPNLFRV 893
Query: 437 HDL----TSRGDDESLIPSPLMLNSENIREDGVYLLENGEDGLIYVGNVVEPTILEQIFG 492
+ ++ DD + L L +E++ G+Y+ ++G +++ G ++ P I + + G
Sbjct: 894 DEWLLKPSAAHDDFKDVLRRLPLAAESLDSRGLYIYDDGFRLVLWFGRMLSPDIAKNLLG 953
Query: 493 VSSLAALPSQAVLEQFDNELSRKVNEVINEIXXXXXXXXXX-XXXXXGEPSGDFFRSF-- 549
V A L S+ ++ +N +S+K+ ++ ++ GE + F
Sbjct: 954 VDFAADL-SRVTFQEQENGMSKKLMRLVKKLRESDPSYHPMCFLVRQGEQPREGFLLLRN 1012
Query: 550 LTEDKAPGGLSYVEFLVHVHRQIQ 573
L ED+ G YV++++ +HRQ+Q
Sbjct: 1013 LIEDQMGGSSGYVDWILQLHRQVQ 1036
>AT2G27460.1 | chr2:11740670-11744867 FORWARD LENGTH=746
Length = 745
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 143/375 (38%), Gaps = 79/375 (21%)
Query: 26 PRTMVGIATFDSAIHFYSLKRAQQQPL-----MLIVPD--------VQDVYTPLQKDLIL 72
P + G+ TF I Y + Q P+ + I PD ++DV LQ +
Sbjct: 153 PGALFGLVTFSHKIGLYDV----QGPIPVVKNVFIPPDGESSLSLELEDVMPLLQ--FLA 206
Query: 73 PVSECRENLEQLLESIPSMFENNRVADSA------------FGAAMKAGFLAMKSTGGKL 120
PV C++ + LE++ + R A + FG AM+A F + S G
Sbjct: 207 PVETCKDRIAAALETLRPITSWERSAGAGQGMDSVLMGGRGFGTAMEALFNYLGSEFGNT 266
Query: 121 LVFQXXXXXXXXXXXXAREAEGRANVST-GDKEPHKLLQ----------PVDKTLKTMAL 169
R G+ + S G++ K + P K L T+A+
Sbjct: 267 FALARVFAFLSGPPDYGR---GQLDTSRYGEQYASKRVDADRALLPEQTPFYKDLATIAV 323
Query: 170 EFAEYQVCVDVFLTTQSYVDIASISVVPNTTGGRVYYYYPFSARSDPAKLFNDLRWNISR 229
+ VCVD+F T Y D+AS+ + +GG ++ Y + +D + L D+ ++R
Sbjct: 324 QSG---VCVDLFAVTNEYTDLASLKFLSIESGGSLFLY----SSTDDSTLPQDMFRMLNR 376
Query: 230 PQGFEAVMRVRCSQGLQVQDYFGNFCKRVPTDIDLPSI---DSDKTIMVTFKHDDKLQEN 286
P F V+R+R S + + FG+F P +L I DS T F+ D +
Sbjct: 377 PYAFNCVLRLRTSTEFKPGNSFGHFFPD-PQYENLQHIICCDSYATYAYDFEFADNTGFS 435
Query: 287 SECG----FQCALLYTTVYG-------------------QRRIRVMNLSLPCTNMLSNLF 323
G Q A YT V QRR+R+ + + ++ ++
Sbjct: 436 RHSGEQPVVQIAFQYTVVVPPEGLSNSEMSSSSRGKHTLQRRLRIRTMQFGTAHNINEIY 495
Query: 324 RYADLETQFTCFLKQ 338
D E + + +
Sbjct: 496 DSVDHEVVLSLLVHK 510
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,695,519
Number of extensions: 410567
Number of successful extensions: 912
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 905
Number of HSP's successfully gapped: 4
Length of query: 577
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 473
Effective length of database: 8,255,305
Effective search space: 3904759265
Effective search space used: 3904759265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)