Os11g0284900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.9).
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Os11g0284900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phospholipid hydroperoxide glutathione peroxidase (EC 1.11.1.9).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.13 | 0.226 | 10.2 | -0.886 | 0.628 | -0.97 | 0.374 | 0.207 | 0.0137 | 3.91 | 67.7 | 1060 | -- | -- |
| 23.17 | 0.224 | 10.2 | -0.845 | 0.626 | -0.961 | 0.338 | -- | 0.0221 | 3.85 | 75.34 | 1085 | -- | -- |
| 23.51 | 0.226 | 10.2 | -0.869 | 0.625 | -0.96 | -- | 0.0879 | 0.0189 | 3.83 | 86.45 | 1094 | -- | -- |
| 23.52 | 0.226 | 10.2 | -0.85 | 0.624 | -0.96 | -- | -- | 0.0221 | 3.82 | 64.19 | 1094 | -- | -- |
| 44.39 | 0.31 | 10.2 | -0.791 | -- | -1.04 | -- | -0.219 | 0.0441 | -- | 34.8 | 1142 | -- | -- |
| 37.29 | 0.286 | 10.1 | -0.563 | 0.715 | -- | 0.347 | -- | 0.188 | 3.21 | -- | -- | -- | -- |
| 37.68 | 0.287 | 10.1 | -0.57 | 0.716 | -- | -- | -- | 0.186 | 3.21 | -- | -- | -- | -- |
| 44.12 | 0.309 | 10.2 | -0.888 | -- | -1.16 | -- | -- | 0.000911 | -- | 328.4 | 1142 | -- | -- |
| 40.13 | 0.295 | 10.1 | -- | 0.646 | -0.59 | -- | -- | 0.171 | 3.61 | 76.26 | 1066 | -- | -- |
| 66.8 | 0.382 | 10.1 | -0.54 | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
| 46.25 | 0.318 | 10.1 | -- | 0.705 | -- | -- | -- | 0.25 | 3.21 | -- | -- | -- | -- |
| 62.32 | 0.368 | 10.1 | -- | -- | -0.797 | -- | -- | 0.152 | -- | 93.9 | 1122 | -- | -- |
| 74.49 | 0.403 | 10.1 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 20 |
| 2 | 22.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 8 | 22.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 9 | 22.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 12 | 22.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 27 | 22.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 21 |
| 50 | 22.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 54 | 22.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 83 | 22.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 160 | 23.00 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 232 | 23.11 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 424 | 23.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 559 | 23.49 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 600 | 23.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 601 | 23.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 683 | 23.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 781 | 23.65 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 899 | 23.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 951 | 23.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |