BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0284900 Os11g0284900|AK101583
(144 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31570.1 | chr2:13438211-13439775 REVERSE LENGTH=170 211 1e-55
AT4G11600.1 | chr4:7010021-7011330 REVERSE LENGTH=233 204 1e-53
AT4G31870.1 | chr4:15410205-15411617 FORWARD LENGTH=234 202 6e-53
AT2G43350.1 | chr2:18009195-18010533 REVERSE LENGTH=207 194 2e-50
AT2G25080.1 | chr2:10668134-10669828 FORWARD LENGTH=237 193 3e-50
AT1G63460.1 | chr1:23535118-23536326 FORWARD LENGTH=168 182 4e-47
AT3G63080.1 | chr3:23310161-23311200 FORWARD LENGTH=174 175 8e-45
AT2G48150.1 | chr2:19688109-19689099 REVERSE LENGTH=171 162 4e-41
>AT2G31570.1 | chr2:13438211-13439775 REVERSE LENGTH=170
Length = 169
Score = 211 bits (536), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 112/126 (88%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
GLT++NYKELNVLYEKYKE+GLEILAFPCNQF GQEPG+NEEI+QTVCTRFKAEFPIFDK
Sbjct: 42 GLTDANYKELNVLYEKYKEQGLEILAFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDK 101
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
+DVNGK APLYK+LK++KGG L D IKWNFTKFLV DGKV++RY+P TSPL+ E DIQ
Sbjct: 102 VDVNGKNTAPLYKYLKAEKGGLLIDAIKWNFTKFLVSPDGKVLQRYSPRTSPLQFEKDIQ 161
Query: 139 KLLGTS 144
LG +
Sbjct: 162 TALGQA 167
>AT4G11600.1 | chr4:7010021-7011330 REVERSE LENGTH=233
Length = 232
Score = 204 bits (519), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 105/126 (83%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
GLTNSNY EL LYEKYK G EILAFPCNQF QEPG+NEEI Q CTRFKAE+PIFDK
Sbjct: 106 GLTNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDK 165
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
+DVNG +AAP+YKFLKS KGG GDGIKWNF KFLV KDG VV+R+APTTSPL IE D++
Sbjct: 166 VDVNGDKAAPVYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVK 225
Query: 139 KLLGTS 144
KLLG +
Sbjct: 226 KLLGVT 231
>AT4G31870.1 | chr4:15410205-15411617 FORWARD LENGTH=234
Length = 233
Score = 202 bits (513), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/136 (72%), Positives = 107/136 (78%), Gaps = 5/136 (3%)
Query: 13 PLLFCS-----GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCT 67
PLL + GLT+SNY EL+ LYEKYK +G EILAFPCNQF GQEPGSN EI+Q CT
Sbjct: 98 PLLIVNVASRCGLTSSNYSELSQLYEKYKNQGFEILAFPCNQFGGQEPGSNPEIKQFACT 157
Query: 68 RFKAEFPIFDKIDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPT 127
RFKAEFPIFDK+DVNG AP+YKFLKS GGFLGD IKWNF KFLV K GKVVERY PT
Sbjct: 158 RFKAEFPIFDKVDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPT 217
Query: 128 TSPLKIENDIQKLLGT 143
TSP +IE DIQKLL
Sbjct: 218 TSPFQIEKDIQKLLAA 233
>AT2G43350.1 | chr2:18009195-18010533 REVERSE LENGTH=207
Length = 206
Score = 194 bits (492), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/126 (71%), Positives = 102/126 (80%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
GLT+ NYKE+N+LY KYK +G EILAFPCNQF QEPGSN EI++TVC FKAEFPIFDK
Sbjct: 81 GLTHGNYKEMNILYAKYKTQGFEILAFPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDK 140
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
I+VNGK PLY FLK QKGG GD IKWNF KFLV + G VV+RYAPTTSPL+IE DI
Sbjct: 141 IEVNGKNTCPLYNFLKEQKGGLFGDAIKWNFAKFLVDRQGNVVDRYAPTTSPLEIEKDIV 200
Query: 139 KLLGTS 144
KLL ++
Sbjct: 201 KLLASA 206
>AT2G25080.1 | chr2:10668134-10669828 FORWARD LENGTH=237
Length = 236
Score = 193 bits (490), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/125 (73%), Positives = 101/125 (80%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
GLT+SNY EL+ LYEKYK +G EILAFPCNQF QEPGSN EI+Q CTRFKAEFPIFDK
Sbjct: 112 GLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDK 171
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
+DVNG AP+Y+FLKS GGFLG IKWNF KFL+ K GKVVERY PTTSP +IE DIQ
Sbjct: 172 VDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQ 231
Query: 139 KLLGT 143
KLL
Sbjct: 232 KLLAA 236
>AT1G63460.1 | chr1:23535118-23536326 FORWARD LENGTH=168
Length = 167
Score = 182 bits (463), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 84/126 (66%), Positives = 103/126 (81%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
G+TNSNY ELN LY +YK+KGLEILAFPCNQF +EPG+N++I VCTRFK+EFPIF+K
Sbjct: 42 GMTNSNYTELNELYNRYKDKGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNK 101
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
I+VNG+ A+PLYKFLK K G GD I+WNF KFLV K+G+ V+RY PTTSPL +E+DI+
Sbjct: 102 IEVNGENASPLYKFLKKGKWGIFGDDIQWNFAKFLVDKNGQAVQRYYPTTSPLTLEHDIK 161
Query: 139 KLLGTS 144
LL S
Sbjct: 162 NLLNIS 167
>AT3G63080.1 | chr3:23310161-23311200 FORWARD LENGTH=174
Length = 173
Score = 175 bits (443), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 96/124 (77%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
G T SNY +L LY KYK++G +LAFPCNQF QEPG++EE Q CTRFKAE+P+F K
Sbjct: 47 GFTESNYTQLTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQK 106
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
+ VNG+ AAP+YKFLKS+K FLG IKWNFTKFLVGKDG+V++RY T SPL I+ DI+
Sbjct: 107 VRVNGQNAAPVYKFLKSKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIE 166
Query: 139 KLLG 142
K L
Sbjct: 167 KALA 170
>AT2G48150.1 | chr2:19688109-19689099 REVERSE LENGTH=171
Length = 170
Score = 162 bits (411), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 92/123 (74%)
Query: 19 GLTNSNYKELNVLYEKYKEKGLEILAFPCNQFAGQEPGSNEEIEQTVCTRFKAEFPIFDK 78
G T +NY +L LY KYK++ EILAFPCNQF QEPG+++E + C RFKAE+P+F K
Sbjct: 45 GFTETNYTQLTELYRKYKDQDFEILAFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQK 104
Query: 79 IDVNGKEAAPLYKFLKSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQ 138
+ VNG+ AAP+YKFLK+ K FLG IKWNFTKFLVGKDG V++RY +PL IE DI+
Sbjct: 105 VRVNGQNAAPIYKFLKASKPTFLGSRIKWNFTKFLVGKDGLVIDRYGTMVTPLSIEKDIK 164
Query: 139 KLL 141
K L
Sbjct: 165 KAL 167
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.140 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,425,111
Number of extensions: 145405
Number of successful extensions: 384
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 384
Number of HSP's successfully gapped: 8
Length of query: 144
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 55
Effective length of database: 8,666,545
Effective search space: 476659975
Effective search space used: 476659975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 106 (45.4 bits)