Os11g0245500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipid-binding START domain containing protein.
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Os11g0245500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipid-binding START domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.96 | 0.63 | 6.78 | 0.361 | 0.805 | 1.98 | -0.821 | -1.91 | -0.0616 | 2.37 | 21.3 | 5012 | -- | -- |
| 184.6 | 0.633 | 6.7 | 0.783 | 0.795 | 2.21 | -0.846 | -- | 0.0374 | 2.37 | 21.39 | 5100 | -- | -- |
| 182.21 | 0.629 | 6.77 | 0.37 | 0.797 | 1.98 | -- | -1.93 | -0.0602 | 2.52 | 21.33 | 5096 | -- | -- |
| 187.05 | 0.637 | 6.69 | 0.804 | 0.788 | 2.23 | -- | -- | 0.0413 | 2.55 | 21.39 | 5114 | -- | -- |
| 216.88 | 0.686 | 6.76 | 0.478 | -- | 1.94 | -- | -1.94 | -0.0411 | -- | 21.5 | 3797 | -- | -- |
| 293.46 | 0.803 | 6.53 | 2.17 | 0.861 | -- | -0.864 | -- | 0.781 | 2.22 | -- | -- | -- | -- |
| 296.21 | 0.806 | 6.53 | 2.19 | 0.862 | -- | -- | -- | 0.786 | 2.32 | -- | -- | -- | -- |
| 217.62 | 0.687 | 6.66 | 1.18 | -- | 2.09 | -- | -- | 0.159 | -- | 21.47 | 2506 | -- | -- |
| 184.81 | 0.633 | 6.71 | -- | 0.812 | 3.03 | -- | -- | -0.0214 | 2.51 | 19.4 | 7991 | -- | -- |
| 340.23 | 0.862 | 6.52 | 2.23 | -- | -- | -- | -- | 0.807 | -- | -- | -- | -- | -- |
| 422.62 | 0.962 | 6.58 | -- | 0.904 | -- | -- | -- | 0.542 | 2.37 | -- | -- | -- | -- |
| 222.54 | 0.695 | 6.71 | -- | -- | 3.09 | -- | -- | -0.0219 | -- | 19.4 | 8108 | -- | -- |
| 470.98 | 1.01 | 6.57 | -- | -- | -- | -- | -- | 0.56 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.12 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 2 | 175.31 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 5 | 176.01 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 15 | 176.05 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 20 | 177.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 23 | 177.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 24 | 177.61 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 38 | 178.15 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 46 | 178.46 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 51 | 178.71 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 69 | 179.47 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 80 | 179.75 | humidity | 70 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 88 | 179.95 | humidity | 60 | 43200 | < th | dose independent | sin | 9 | NA |
| 97 | 180.09 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 107 | 180.31 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 139 | 180.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 158 | 180.95 | humidity | 60 | 43200 | < th | dose dependent | sin | 9 | NA |
| 168 | 181.09 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 179 | 181.19 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 197 | 181.43 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 19 |
| 210 | 181.61 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 211 | 181.62 | humidity | 60 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 236 | 181.89 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 256 | 182.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 286 | 182.28 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 317 | 182.44 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 349 | 182.58 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 360 | 182.63 | humidity | 60 | 43200 | > th | dose independent | sin | 9 | NA |
| 365 | 182.66 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 369 | 182.71 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 382 | 182.77 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 418 | 182.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 13 |
| 422 | 182.96 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 435 | 183.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 441 | 183.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 449 | 183.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 14 |
| 460 | 183.09 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 469 | 183.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 486 | 183.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 507 | 183.27 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 508 | 183.28 | humidity | 70 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 593 | 183.58 | temperature | 20 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 622 | 183.67 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 623 | 183.67 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 638 | 183.71 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 639 | 183.71 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 7 |
| 694 | 183.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 715 | 183.93 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 729 | 183.95 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 733 | 183.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 752 | 184.00 | radiation | 1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 770 | 184.04 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 775 | 184.05 | radiation | 1 | 14400 | > th | dose independent | sin | 9 | NA |
| 786 | 184.07 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 787 | 184.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 800 | 184.08 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 818 | 184.12 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 7 |
| 901 | 184.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 903 | 184.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 962 | 184.39 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 989 | 184.43 | radiation | 1 | 14400 | < th | dose independent | sin | 8 | NA |