Os11g0242600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF579, plant family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0242600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF579, plant family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.37 | 0.816 | 10.3 | -0.34 | 1.3 | 1.6 | 0.315 | 2.41 | -0.914 | 18.6 | 68 | 1200 | -- | -- |
| 312.41 | 0.823 | 10.4 | -0.599 | 1.29 | 1.75 | 0.424 | -- | -0.922 | 18.6 | 67.54 | 1206 | -- | -- |
| 301.57 | 0.809 | 10.3 | -0.343 | 1.3 | 1.6 | -- | 2.42 | -0.914 | 18.6 | 68 | 1203 | -- | -- |
| 312.83 | 0.824 | 10.4 | -0.594 | 1.29 | 1.76 | -- | -- | -0.908 | 18.6 | 67.72 | 1206 | -- | -- |
| 356.79 | 0.88 | 10.4 | -0.329 | -- | 2.11 | -- | 3.21 | -0.976 | -- | 70 | 727 | -- | -- |
| 422.12 | 0.963 | 10.4 | -0.239 | 1.37 | -- | 0.72 | -- | -0.977 | 19.9 | -- | -- | -- | -- |
| 423.63 | 0.964 | 10.4 | -0.258 | 1.37 | -- | -- | -- | -0.975 | 19.9 | -- | -- | -- | -- |
| 370.63 | 0.897 | 10.4 | -0.539 | -- | 2.18 | -- | -- | -1.08 | -- | 70 | 710 | -- | -- |
| 321.81 | 0.836 | 10.4 | -- | 1.29 | 1.68 | -- | -- | -0.838 | 18.7 | 67.43 | 1206 | -- | -- |
| 525.27 | 1.07 | 10.4 | -0.274 | -- | -- | -- | -- | -0.994 | -- | -- | -- | -- | -- |
| 425.38 | 0.965 | 10.4 | -- | 1.37 | -- | -- | -- | -0.947 | 19.8 | -- | -- | -- | -- |
| 377.88 | 0.905 | 10.3 | -- | -- | 2.46 | -- | -- | -0.977 | -- | 69 | 2015 | -- | -- |
| 527.24 | 1.07 | 10.4 | -- | -- | -- | -- | -- | -0.964 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 299.98 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 2 | 300.30 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 3 | 305.86 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 21 | 306.70 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 13 |
| 24 | 306.74 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 25 | 306.83 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 40 | 308.19 | humidity | 50.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 42 | 308.48 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 57 | 308.73 | humidity | 50.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 60 | 310.36 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 15 |
| 62 | 310.70 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 15 |
| 84 | 311.39 | humidity | 60.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 119 | 312.50 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 22 | 10 |
| 134 | 313.12 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 19 |
| 150 | 313.30 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 155 | 313.35 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 167 | 313.53 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 173 | 313.65 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 188 | 314.22 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 189 | 314.44 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 205 | 314.53 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 292 | 315.55 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 313 | 315.69 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 352 | 316.48 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 357 | 316.54 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 373 | 316.61 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 6 |
| 470 | 317.71 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 478 | 317.95 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 574 | 318.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 719 | 319.90 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 739 | 320.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 807 | 320.96 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 837 | 321.18 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 866 | 321.30 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 887 | 321.34 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 891 | 321.37 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 18 |
| 892 | 321.37 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 901 | 321.48 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 937 | 321.65 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 949 | 321.75 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 954 | 321.88 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 958 | 321.96 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 989 | 322.17 | radiation | 30.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 990 | 322.17 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |