Os11g0242400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rieske [2Fe-2S] region domain containing protein.
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Os11g0242400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Rieske [2Fe-2S] region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.31 | 0.371 | 12.6 | -1.04 | 1.36 | 1.07 | 0.765 | -0.957 | -0.508 | 9.25 | 23.43 | 921 | -- | -- |
| 62.61 | 0.369 | 12.5 | -0.826 | 1.36 | 0.983 | 0.914 | -- | -0.433 | 9.22 | 24 | 924 | -- | -- |
| 64.03 | 0.373 | 12.6 | -1.2 | 1.36 | 1.11 | -- | -1.74 | -0.567 | 9.26 | 23.1 | 923 | -- | -- |
| 65.42 | 0.377 | 12.5 | -0.781 | 1.32 | 0.937 | -- | -- | -0.423 | 9.34 | 24 | 976 | -- | -- |
| 135.88 | 0.543 | 12.6 | -0.973 | -- | 0.741 | -- | -0.603 | -0.521 | -- | 22.98 | 1433 | -- | -- |
| 86.41 | 0.436 | 12.5 | -0.554 | 1.08 | -- | 0.703 | -- | -0.302 | 9.03 | -- | -- | -- | -- |
| 88.12 | 0.44 | 12.5 | -0.53 | 1.08 | -- | -- | -- | -0.302 | 9.04 | -- | -- | -- | -- |
| 136.18 | 0.544 | 12.6 | -0.831 | -- | 0.734 | -- | -- | -0.429 | -- | 23.79 | 5806 | -- | -- |
| 80.31 | 0.417 | 12.5 | -- | 1.25 | 0.72 | -- | -- | -0.288 | 9.35 | 24.97 | 1011 | -- | -- |
| 155.4 | 0.582 | 12.5 | -0.532 | -- | -- | -- | -- | -0.295 | -- | -- | -- | -- | -- |
| 95.52 | 0.457 | 12.5 | -- | 1.08 | -- | -- | -- | -0.243 | 9.08 | -- | -- | -- | -- |
| 148.38 | 0.567 | 12.5 | -- | -- | 0.47 | -- | -- | -0.27 | -- | 34.29 | 7173 | -- | -- |
| 162.85 | 0.596 | 12.5 | -- | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.90 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 2 | 61.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 5 | 61.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 44 | 62.47 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 47 | 62.51 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 51 | 62.54 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 53 | 62.55 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 76 | 62.71 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 85 | 62.81 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 98 | 62.94 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 113 | 62.99 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 168 | 63.28 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 11 |
| 187 | 63.36 | temperature | 25 | 720 | > th | dose dependent | sin | 17 | NA |
| 192 | 63.39 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 193 | 63.39 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 218 | 63.50 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 228 | 63.55 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 231 | 63.55 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 246 | 63.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 285 | 63.69 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 308 | 63.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 315 | 63.78 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 11 |
| 321 | 63.78 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 357 | 63.83 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 385 | 63.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 387 | 63.88 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 395 | 63.89 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 416 | 63.92 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 491 | 64.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 492 | 64.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 498 | 64.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 576 | 64.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 582 | 64.15 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 616 | 64.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 13 |
| 645 | 64.23 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 691 | 64.30 | humidity | 50 | 720 | > th | dose dependent | sin | 19 | NA |
| 707 | 64.33 | temperature | 15 | 720 | > th | dose dependent | sin | 20 | NA |
| 721 | 64.35 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 725 | 64.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 742 | 64.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 748 | 64.39 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 753 | 64.39 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 21 |
| 761 | 64.40 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 19 |
| 770 | 64.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 853 | 64.51 | humidity | 50 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 969 | 64.67 | humidity | 50 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 980 | 64.70 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 21 |