Os11g0241200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
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Os11g0241200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.71 | 0.547 | 11.2 | -0.433 | 1.18 | 3.02 | -0.16 | -5.87 | -0.62 | 19.7 | 49.72 | 334 | -- | -- |
| 140.81 | 0.553 | 11.2 | -0.276 | 1.21 | 1.59 | -0.0617 | -- | -0.634 | 19.7 | 50.36 | 338 | -- | -- |
| 135.78 | 0.543 | 11.2 | -0.427 | 1.18 | 2.99 | -- | -5.86 | -0.62 | 19.7 | 49.72 | 335 | -- | -- |
| 138.6 | 0.548 | 11.2 | -0.286 | 1.19 | 1.07 | -- | -- | -0.629 | 19.8 | 53 | 339 | -- | -- |
| 201.63 | 0.661 | 11.2 | -0.503 | -- | 3.72 | -- | -5.87 | -0.574 | -- | 50 | 394 | -- | -- |
| 155.94 | 0.585 | 11.2 | -0.142 | 1.41 | -- | 0.337 | -- | -0.677 | 19.5 | -- | -- | -- | -- |
| 156.25 | 0.585 | 11.2 | -0.15 | 1.41 | -- | -- | -- | -0.677 | 19.5 | -- | -- | -- | -- |
| 164.18 | 0.597 | 11.2 | -0.304 | -- | 1.51 | -- | -- | -0.744 | -- | 75.38 | 642 | -- | -- |
| 140.05 | 0.551 | 11.2 | -- | 1.2 | 0.93 | -- | -- | -0.581 | 19.7 | 53 | 394 | -- | -- |
| 262.34 | 0.757 | 11.2 | -0.172 | -- | -- | -- | -- | -0.699 | -- | -- | -- | -- | -- |
| 156.84 | 0.586 | 11.2 | -- | 1.41 | -- | -- | -- | -0.66 | 19.5 | -- | -- | -- | -- |
| 166.6 | 0.601 | 11.2 | -- | -- | 1.49 | -- | -- | -0.711 | -- | 75.62 | 636 | -- | -- |
| 263.12 | 0.757 | 11.2 | -- | -- | -- | -- | -- | -0.68 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.27 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 5 |
| 2 | 126.31 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 6 |
| 5 | 126.51 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 6 |
| 7 | 126.62 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 16 | 16 |
| 16 | 127.00 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 21 | 127.40 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 9 |
| 22 | 127.46 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 29 | 127.61 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 6 |
| 39 | 127.77 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 45 | 127.92 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 64 | 128.42 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 67 | 128.53 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 14 |
| 71 | 128.61 | humidity | 90.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 76 | 128.70 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 3 |
| 84 | 129.01 | humidity | 70.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 87 | 129.07 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 18 |
| 95 | 129.24 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 97 | 129.26 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 98 | 129.27 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 15 | 3 |
| 99 | 129.28 | radiation | 1.0 | 270 | > th | dose independent | rect. | 15 | 4 |
| 110 | 129.33 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 14 |
| 115 | 129.47 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 118 | 129.54 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 16 | 2 |
| 122 | 129.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 6 |
| 123 | 129.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 141 | 129.70 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 143 | 129.76 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 144 | 129.77 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 146 | 129.79 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 189 | 130.37 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 197 | 130.50 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 209 | 130.67 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 211 | 130.67 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 6 |
| 213 | 130.67 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 18 |
| 219 | 130.72 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 1 |
| 236 | 130.97 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 245 | 131.14 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 3 |
| 257 | 131.23 | humidity | 70.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 265 | 131.31 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 18 |
| 293 | 131.35 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 10 | 14 |
| 309 | 131.48 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 316 | 131.53 | humidity | 70.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 357 | 131.68 | humidity | 80.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 369 | 131.77 | radiation | 1.0 | 270 | > th | dose independent | sin | 14 | NA |
| 394 | 131.91 | humidity | 80.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 410 | 132.00 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 433 | 132.14 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 18 |
| 434 | 132.14 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 449 | 132.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 5 |
| 451 | 132.16 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 454 | 132.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 500 | 132.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 514 | 132.39 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 516 | 132.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 577 | 132.68 | wind | 9.0 | 10 | < th | dose independent | rect. | 21 | 19 |
| 586 | 132.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 2 |
| 587 | 132.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 2 |
| 589 | 132.78 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 595 | 132.82 | humidity | 80.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 602 | 132.87 | radiation | 20.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 623 | 133.04 | radiation | 1.0 | 270 | < th | dose independent | sin | 14 | NA |
| 627 | 133.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 645 | 133.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 655 | 133.19 | humidity | 80.0 | 30 | < th | dose independent | rect. | 16 | 14 |
| 657 | 133.20 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 670 | 133.28 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 672 | 133.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 673 | 133.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 675 | 133.29 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 15 | 2 |
| 678 | 133.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 681 | 133.30 | radiation | 40.0 | 720 | > th | dose dependent | rect. | 13 | 22 |
| 684 | 133.32 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 18 |
| 722 | 133.56 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 735 | 133.62 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 742 | 133.65 | humidity | 70.0 | 270 | > th | dose independent | rect. | 11 | 13 |
| 744 | 133.66 | humidity | 80.0 | 30 | < th | dose independent | rect. | 16 | 12 |
| 762 | 133.75 | radiation | 40.0 | 90 | < th | dose independent | rect. | 21 | 18 |
| 811 | 133.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 10 |
| 830 | 133.92 | humidity | 70.0 | 270 | > th | dose independent | sin | 14 | NA |
| 843 | 133.93 | humidity | 70.0 | 270 | < th | dose independent | sin | 14 | NA |
| 854 | 133.98 | radiation | 20.0 | 30 | < th | dose independent | rect. | 12 | 9 |
| 860 | 134.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 10 |
| 862 | 134.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 870 | 134.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 875 | 134.03 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 876 | 134.03 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 882 | 134.04 | humidity | 50.0 | 10 | > th | dose independent | rect. | 21 | 19 |
| 888 | 134.06 | radiation | 40.0 | 720 | > th | dose independent | rect. | 14 | 21 |
| 897 | 134.09 | radiation | 20.0 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 900 | 134.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 902 | 134.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 951 | 134.28 | radiation | 40.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 952 | 134.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 2 |
| 957 | 134.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 960 | 134.30 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 967 | 134.30 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 19 |
| 970 | 134.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 975 | 134.32 | wind | 1.0 | 30 | > th | dose dependent | rect. | 16 | 5 |
| 990 | 134.37 | radiation | 40.0 | 720 | < th | dose independent | rect. | 3 | 20 |