Os11g0234200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os11g0234200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.17 | 0.576 | 6.17 | -0.422 | 1.86 | 2.54 | 1.51 | -1.17 | -0.193 | 15.7 | 24.2 | 19 | -- | -- |
| 151.94 | 0.574 | 6.18 | -0.546 | 1.87 | 2.72 | 1.8 | -- | -0.203 | 15.7 | 24.1 | 37 | -- | -- |
| 156.04 | 0.582 | 6.17 | -0.33 | 1.88 | 2.52 | -- | -1.74 | -0.191 | 15.7 | 24.2 | 28 | -- | -- |
| 162.27 | 0.593 | 6.18 | -0.543 | 1.87 | 2.68 | -- | -- | -0.218 | 15.7 | 24.1 | 40 | -- | -- |
| 331.72 | 0.853 | 6.17 | -0.508 | -- | 1.52 | -- | -2.7 | -0.365 | -- | 23.7 | 15 | -- | -- |
| 253.41 | 0.746 | 6.29 | -1.18 | 1.54 | -- | 1.87 | -- | -0.667 | 16.2 | -- | -- | -- | -- |
| 262.95 | 0.759 | 6.29 | -1.16 | 1.56 | -- | -- | -- | -0.657 | 16.4 | -- | -- | -- | -- |
| 342.22 | 0.862 | 6.22 | -0.827 | -- | 1.93 | -- | -- | -0.441 | -- | 23.2 | 40 | -- | -- |
| 169.32 | 0.606 | 6.16 | -- | 1.91 | 2.9 | -- | -- | -0.128 | 15.7 | 24.1 | 48 | -- | -- |
| 393.46 | 0.927 | 6.28 | -1.22 | -- | -- | -- | -- | -0.698 | -- | -- | -- | -- | -- |
| 298.52 | 0.808 | 6.26 | -- | 1.58 | -- | -- | -- | -0.527 | 16.4 | -- | -- | -- | -- |
| 358.81 | 0.882 | 6.19 | -- | -- | 2.21 | -- | -- | -0.309 | -- | 23.39 | 53 | -- | -- |
| 432.92 | 0.971 | 6.24 | -- | -- | -- | -- | -- | -0.562 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.98 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 3 | 149.45 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 149.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 6 | 150.09 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 12 | 150.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 21 | 151.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 22 | 152.11 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 23 | 152.13 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 26 | 152.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 35 | 152.65 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 37 | 152.67 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 39 | 152.72 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 42 | 152.84 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 45 | 152.90 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 96 | 158.00 | temperature | 25 | 10 | < th | dose dependent | sin | 18 | NA |
| 99 | 158.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 186 | 162.76 | temperature | 25 | 720 | < th | dose dependent | sin | 21 | NA |
| 188 | 162.85 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 23 |
| 197 | 163.36 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 21 |
| 240 | 165.82 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 283 | 167.89 | temperature | 20 | 10 | < th | dose independent | rect. | 4 | 20 |
| 358 | 169.63 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 14 |
| 405 | 170.85 | humidity | 50 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 436 | 171.57 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 456 | 171.95 | temperature | 20 | 10 | < th | dose independent | rect. | 2 | 22 |
| 485 | 172.40 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 23 |
| 507 | 172.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 511 | 172.86 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 560 | 173.77 | temperature | 20 | 720 | > th | dose independent | rect. | 9 | 10 |
| 596 | 174.39 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 17 |
| 601 | 174.51 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 645 | 175.12 | temperature | 20 | 720 | > th | dose independent | rect. | 7 | 14 |
| 683 | 175.57 | temperature | 20 | 10 | < th | dose independent | rect. | 13 | 23 |
| 686 | 175.61 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 695 | 175.70 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 696 | 175.70 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 23 |
| 699 | 175.72 | temperature | 20 | 30 | < th | dose independent | rect. | 11 | 23 |
| 702 | 175.73 | temperature | 15 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 706 | 175.77 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |
| 714 | 175.83 | temperature | 20 | 30 | < th | dose independent | rect. | 7 | 23 |
| 716 | 175.84 | temperature | 20 | 30 | < th | dose independent | rect. | 15 | 23 |
| 721 | 175.87 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 722 | 175.90 | temperature | 20 | 30 | < th | dose independent | rect. | 21 | 23 |
| 726 | 175.93 | temperature | 20 | 30 | < th | dose independent | rect. | 19 | 23 |
| 727 | 175.94 | temperature | 20 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 748 | 176.13 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 764 | 176.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 7 |
| 781 | 176.58 | temperature | 20 | 10 | < th | dose independent | sin | 19 | NA |
| 835 | 177.08 | temperature | 20 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 878 | 177.51 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 928 | 177.93 | radiation | 20 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 949 | 178.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 952 | 178.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 8 |