BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0234200 Os11g0234200|AK105440
(715 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33420.1 | chr1:12121063-12123346 REVERSE LENGTH=698 487 e-138
AT5G22260.1 | chr5:7367707-7370192 REVERSE LENGTH=673 262 4e-70
AT1G66170.1 | chr1:24638793-24641222 REVERSE LENGTH=705 157 2e-38
AT2G01810.1 | chr2:347537-349952 FORWARD LENGTH=698 131 1e-30
AT2G07714.1 | chr2:3407671-3408506 REVERSE LENGTH=197 82 1e-15
ATMG00550.1 | chrM:151265-151747 REVERSE LENGTH=161 60 4e-09
AT1G32810.2 | chr1:11881810-11885843 FORWARD LENGTH=1069 57 3e-08
AT4G10600.1 | chr4:6547934-6548647 REVERSE LENGTH=238 55 2e-07
>AT1G33420.1 | chr1:12121063-12123346 REVERSE LENGTH=698
Length = 697
Score = 487 bits (1254), Expect = e-138, Method: Compositional matrix adjust.
Identities = 274/694 (39%), Positives = 377/694 (54%), Gaps = 57/694 (8%)
Query: 22 KRARVTAEPS--LLDVRAFPGQKEEGEKQPARXXXXXXXXXXXTFRAQVRGFLARCA-VA 78
KRAR + S L D FP + GE FR VR FLA A V
Sbjct: 11 KRARRSNRISADLYDFSTFPTAEINGES-----------TTLPPFRDGVRTFLATHARVT 59
Query: 79 VPASEAGELSPGMSSWHVGF--------TTXXXXXXXXXXXXXXXXXXXXXXYCEHCTVA 130
P S L + +W + + YCEHC V
Sbjct: 60 FPPST---LFSSLMTWQIMLRPGDSTDGSDLSSKLVSLDVVEEDVTRSSRSVYCEHCCVV 116
Query: 131 GWSKHPVCSKRYHFIIRNENETGTSKTCRRCGFMVALQE-TRCPSCNHVGLSRDDPEDWD 189
GWS HPVC KRY FIIR+ G +K C RCG L E + C C+ D E+W
Sbjct: 117 GWSSHPVCRKRYRFIIRS---GGDTKACTRCGNTQNLSEGSNCKWCSMAL----DIENWV 169
Query: 190 YVQLESPRHLLHGIVHENGFGHLVRINGREGGSSVMTGSQLINFWDRLCRYLRVRKVSVI 249
Y QLE HLLHG++H NG+ HL+ +NGREGGS +TG +++FWDRLC L VRK SV+
Sbjct: 170 YSQLEDNTHLLHGVIHSNGYAHLLCLNGREGGSGFLTGRAIMDFWDRLCSSLAVRKASVM 229
Query: 250 DVSKKYGADYRSLHAVATGCSWYGLWGFKLSSGSFGITPQDYSKAVESLSSVPLSNFFPH 309
DVS+KYG DYR LH + GCSWY WG++ SGS+ +T + Y AV++LS++PLS F
Sbjct: 230 DVSRKYGMDYRLLHGITRGCSWYSEWGYEFKSGSYALTKEAYQSAVDTLSAIPLSEFLFQ 289
Query: 310 TRSPRNQLQNTIAFYQSLSRHPLTTIRELFAYIMELATGKSVHKEKMAYDANYQEEFPEE 369
R PR QL + I+FYQSLS L T+++LF++++++ S K A ++ + +
Sbjct: 290 GRKPRTQLHSIISFYQSLSCSELVTVKDLFSFLLQMIRENS---SKPASKSSVLCAWSKS 346
Query: 370 ELQRATNIALKILRAADR----WVATRTLKAVTSHPIGSPQLVDYCIKTLGGTRTDDG-M 424
+++R +KIL+A+ R WV LK SPQL+DYC+K GG DDG
Sbjct: 347 DVERVQQTMVKILKASGRPQANWVTRWALKRSICKS-ASPQLIDYCLKHFGGVLVDDGSR 405
Query: 425 VVAIRCNSEMNTVEYRLTTET---LFPPNNVCTLTQDHLFRDIKFLYDALLYPYTMHPYM 481
VV+ RCN N EYRL + +V + +H+ +D+++LY+ LL+P TM +
Sbjct: 406 VVSSRCNPGSNDFEYRLESVNNVHRLSNQDVNNASVEHVKQDLRYLYETLLHPQTMAEFR 465
Query: 482 PEENYQHAKRSAMILLDCKQFIKHYDLEEDFLPQ--NPSQLHIWCQVELADQVDDPPCIP 539
+ +A +LDCK FIK D+L NP +++WC VEL+D++ + P P
Sbjct: 466 SRATREKMIDAATKILDCKHFIK------DYLSSTVNPVAINLWCCVELSDELKESPAPP 519
Query: 540 AELITLPQAATIADLKGEAARAFRDIYLMLQSFVADQLLDCATASDTTQIKLLFGAKGAV 599
E + LP AT++DLK EAA+AF+++Y M + F ++LL + D+ +K L G G +
Sbjct: 520 PERLVLPLNATVSDLKIEAAKAFQEVYAMFKRFEVEELLGYGSIDDSITLKFLVGTNGVI 579
Query: 600 HIKGRCIGGERRFAIYRMERGVDKWTVKCSCGATDDDGERMLSCDTCHMWMHTRCAGISD 659
IKGRC + YRMERGVD W V C CG DDDGERML+CD C +W HTRC GI++
Sbjct: 580 RIKGRC--SKHGLLRYRMERGVDNWKVDCKCGTKDDDGERMLACDGCGVWHHTRCIGINN 637
Query: 660 FDRVPKRYVCKSC--KLTHKPKSSGPRLMYSSAP 691
D +P +++C C + KPK S S P
Sbjct: 638 ADALPSKFLCFRCIELYSKKPKQSKKERGSSQVP 671
>AT5G22260.1 | chr5:7367707-7370192 REVERSE LENGTH=673
Length = 672
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 174/599 (29%), Positives = 289/599 (48%), Gaps = 63/599 (10%)
Query: 124 CEHCTVAGWSKHPVCSKRYHFIIRNENETGTSKTCRRCGFMVALQETRCPSCNHVGLSRD 183
C HC GW +C+K+YHF+I ++ G+ +E S +H+
Sbjct: 98 CNHCQYVGWGNQMICNKKYHFVIPSKETMAAFLKLEGGGYAFPEKE----SFSHL----- 148
Query: 184 DPEDWDYVQLESPRHLLHGIVHENGFGHLVRINGREGGSSVMTGSQLINFWDRLCRYLRV 243
V+L+ H+LHG H NGFGHL+ +NG E GS +TG Q+++ WDRLC L+
Sbjct: 149 -------VELQG--HVLHGFFHSNGFGHLLSLNGIETGSD-LTGHQVMDLWDRLCTGLKA 198
Query: 244 RKVSVIDVSKKYGADYRSLHAVATGCSWYGLWGFKLSSGSFGITPQDYSKAVESLSSVPL 303
RK+ + D S K G + R LH VA G W+G WG++ SG++G+T + Y KA+ES+ ++PL
Sbjct: 199 RKIGLNDASHKKGMELRLLHGVAKGEPWFGRWGYRFGSGTYGVTQKIYEKALESVRNIPL 258
Query: 304 SNFFPHTRSPRNQLQNTIAFYQSLSRHPLTTIRELFAYIMELATG------KSVHKEKMA 357
H S + ++ YQSLS PL T+ +LF +++ L + S + ++
Sbjct: 259 CLLNHHLTSLNRETPILLSKYQSLSTEPLITLSDLFRFMLHLHSRLPRDNYMSNSRNQII 318
Query: 358 YDANYQEEFPEEELQRATNIALKILRAAD-RWVATRTLKAVTSHPIGSPQLVDYCIKTLG 416
+ + ++ +Q A + ++ L+ + RW++ + ++ + IG L+D+ +K+LG
Sbjct: 319 SIDSTNCRWSQKRIQMAIKVVIESLKRVEYRWISRQEVRDAARNYIGDTGLLDFVLKSLG 378
Query: 417 GTRTDDGMVVAIRCNSEMNTVEYRLT-TETLFPPNN--VCTL-----------------T 456
+ +V N +EY L L P +N + TL T
Sbjct: 379 NQVVGN-YLVRRSLNPVKKVLEYSLEDISNLLPSSNNELITLQNQNSMGKMATNGHNKIT 437
Query: 457 QDHLFRDIKFLYDALLYPY--TMHPYMPEENYQHAKRSAMILLDCKQFIKHYDLEEDFLP 514
+ + +D+ + Y +L Y + P N ++ +LD K FIK Y D
Sbjct: 438 RGQVMKDMFYFYKHILMDYKGVLGPIGGILN--QIGMASRAILDAKYFIKEYHYIRDTSA 495
Query: 515 QN-----PSQLHIWCQV--ELADQVDDPPCIPAELITLPQAATIADLKGEAARAFRDIYL 567
+ +L I+C + + ++ P E I + + AT++++ GEA R FRDIY
Sbjct: 496 KTLHLDRGEELGIFCTIAWKCHHHNNEIKVPPQECIVVKKDATLSEVYGEAERVFRDIYW 555
Query: 568 MLQSFVADQLLDCATASDTTQIKLLFGAKGAVHIKGRCIGGERRFAI---YRMERGVDKW 624
L+ V + ++ L G KG V ++G +G + Y +
Sbjct: 556 ELRDVVVESVVGGQIEITRVDEMALNGNKGLV-LEGN-VGMMMNIEVTKCYEDDDKKKDK 613
Query: 625 TVKCSCGATDDDGERMLSCDTCHMWMHTRCAGISDFDRVPKRYVCKSCKLTHKPKSSGP 683
++C CGAT++DGERM+ CD C +W HTRC G+ + VP+ ++C+SC P S P
Sbjct: 614 RIECECGATEEDGERMVCCDICEVWQHTRCVGVQHNEEVPRIFLCQSCDQHLIPLSFLP 672
>AT1G66170.1 | chr1:24638793-24641222 REVERSE LENGTH=705
Length = 704
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 64 FRAQVRGFLARCAVAVPASEAGELSPGMSSWHVGFTTXXXXXXXXXXXXXXXXXXXXXXY 123
FR Q+R FL CA E ++ GM+ W + Y
Sbjct: 37 FRDQIRVFLRDCA----EIEDYDIR-GMTVWCTLLSHETKSSLIPLYIVEENVKHSSEPY 91
Query: 124 CEHCTVAGWSKHPVCSKRYHFIIRNENETGTSKTCRRCGFMVALQETRCPSCNHVGLSRD 183
C+HC GWS H V ++YHFII + E + + L+ D
Sbjct: 92 CDHCRCTGWSNHFVSKRKYHFIIPIDTE-----------WSLPLE--------------D 126
Query: 184 DPEDWDYVQLESPRHLLHGIVHENGFGHLVRINGREGGSSVMTGSQLINFWDRLCRYLRV 243
D D S H+LHG++H NGFGHLV +NG E GS + G ++++FWDRLC L
Sbjct: 127 DAFD-------SQSHVLHGLIHCNGFGHLVCVNGMESGSKYLCGREIVDFWDRLCNSLGA 179
Query: 244 RKVSVIDVSKKYGADYRSLHAVATGCSWYGLWGFKLSSGSFGITPQDYSKAVESLSSVPL 303
R ++V D++KK + R L+ VA G SW+G WG+K GSFG+T +Y A+E+L S+ +
Sbjct: 180 RMITVEDLAKKRSVELRLLYGVAYGHSWFGRWGYKFCCGSFGVTKNEYENAIEALGSLEI 239
Query: 304 SNF---FPHTRSPRNQLQNTIAFYQSLSRHPLTTIRELFAYIMELATGKSVHK 353
F R + ++ +Y+ +S L T R+L +++ + + S K
Sbjct: 240 DQIEFDFGELRQSK-EINQVFRYYREMSEGHLKTFRDLLRFMLIIKSHASPQK 291
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 21/190 (11%)
Query: 489 AKRSAMILLDCKQFIKHYDLEEDFLPQNPSQLHIWCQVE------LADQVDDPPCIPAEL 542
+ + +LD K FIK + + ++ N + L C++ ++Q + P P EL
Sbjct: 479 VRSATQAILDSKHFIKEWPIWDN----NDTVLQFLCRINPSLVDVRSEQTTELP--PGEL 532
Query: 543 ITLPQAATIADLKGEAARAFRDIYLMLQSFVADQLLDCATASDTTQIKLLFGAKGAVHIK 602
+T+P AT+ DLK FRD Y +L +FV ++ + + L G+ A+ ++
Sbjct: 533 VTVPLQATVYDLKQAIEETFRDTYCILSNFVVTEI------DEVEEDMSLIGSCSALTVR 586
Query: 603 GRCIGGERRFAIYRMERGVDKWTVKCSCGATDDDGERMLSCDTCHMWMHTRCAGISDFDR 662
G I E + + + G D W VKC C A DDDGERM+SCD C +W HTRC GI D D
Sbjct: 587 GHGIDLESKL---KCQGGCDTWMVKCICRARDDDGERMISCDVCEVWQHTRCCGIDDSDT 643
Query: 663 VPKRYVCKSC 672
+P +VC +C
Sbjct: 644 LPPLFVCSNC 653
>AT2G01810.1 | chr2:347537-349952 FORWARD LENGTH=698
Length = 697
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 34/233 (14%)
Query: 124 CEHCTVAGWSKHPVCSKRYHFIIRNENETGTSKTCRRCGFMVALQETRCPSCNHVGLSRD 183
C+ C GW H V ++YH II N +E +
Sbjct: 98 CDFCRCFGWGHHYVTKRKYHMIIPNRDEW------------------------------N 127
Query: 184 DPEDWDYVQLESPRHLLHGIVHENGFGHLVRINGREGGSSVMTGSQLINFWDRLCRYLRV 243
+P + + L S HL+HG++H NGFGHL+ IN + ++G Q+++FWDRLC L
Sbjct: 128 EPLKRESLTLSS--HLMHGLIHCNGFGHLLCINTDLDDPNHLSGDQIMDFWDRLCSTLHT 185
Query: 244 RKVSVIDVSKKYGADYRSLHAVATGCSWYGLWGFKLSSGSFGITPQDYSKAVESLSSVPL 303
RK+S+ D SKK D R LH VA G W+G W + S GSFG+ Y +A+ +LSS+ +
Sbjct: 186 RKISLDDTSKKGAMDLRLLHGVAYGRPWFGKWDYMFSHGSFGVKKDLYWRAILTLSSIEV 245
Query: 304 SNFFPHTR--SPRNQLQNTIAFYQSLSRHPLTTIRELFAYIMELATGKSVHKE 354
S ++ I FY+ + PL T+ +L +++ + + ++
Sbjct: 246 DKILEELSGTSKGRVMKKIIDFYRGSTESPLATLSDLLRFMLGFISKAPIERK 298
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 146/331 (44%), Gaps = 46/331 (13%)
Query: 366 FPEEELQRATNIALKILRAADRWVATRTLKAVTSHPIGSPQLVDYCIKTLGGTRTDDGMV 425
+P L A LK+ + + ++ + L+ IG L+D+ +K + D +
Sbjct: 374 WPGRRLNDAAQAVLKVFKERNSTISRQDLREAVRSSIGDTGLIDFLLKHIDKVLIGD-QI 432
Query: 426 VAIRCNSEMNTVEYRLTT------------ETLFPPNNV--CTLTQDHL--FRDIKFLYD 469
V N + +++ L T + P CT T L + DI +LY
Sbjct: 433 VQRSTNPKSRMLQFSLRTINSRVQEQKRKKKRKVKPQETSECTSTTPGLSPYDDILYLYQ 492
Query: 470 ALLYPYTMHPYMPEENYQHAKRSAMILLDCKQFIKHYDLEEDFLPQNPSQLHIWCQVE-- 527
LL Y P+ + ++ ++L CK F+K + +E QN L + CQV
Sbjct: 493 NLLLTY------PDSDLY--SEASQVILKCKSFVKEWSYQE----QN--HLTVSCQVLPN 538
Query: 528 ----LADQVDDPPCIPAELITLPQAATIADLKGEAARAFRDIYLMLQSFVADQLLD--CA 581
L D P P +L+ +P+ ATI +LK A + RD Y + ++F ++ +
Sbjct: 539 HEELLRDFTRLLP--PGDLVAVPENATIRELKSAAEKVLRDTYCITETFEVLEIRNRYLE 596
Query: 582 TASDTTQIKLLFGAKGAVHIKGRCIGGERRFAIYRMERGVDKWTVKCSCGATDDDGERML 641
D +K + V G IG E R+ E G D WTV C CGA DDDGERM+
Sbjct: 597 KLDDNVSLKSQGNTEFMVKGFGLDIGTELRY-----EGGFDDWTVDCKCGARDDDGERMV 651
Query: 642 SCDTCHMWMHTRCAGISDFDRVPKRYVCKSC 672
+CD C +W HT C I D + VP ++C C
Sbjct: 652 ACDACKVWHHTLCNSIEDDEAVPSVFLCNMC 682
>AT2G07714.1 | chr2:3407671-3408506 REVERSE LENGTH=197
Length = 196
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 231 INFWDRLCRYLRVRKVSVIDVSKKYGADYRSLHAVATGCSWYGLWGFKLSSGSFGITPQD 290
++ WDR C L RK+++ D S+K D R LH VA G SW+G WG++ SGSFG+
Sbjct: 1 MDLWDRFCVNLHTRKITLEDESQKRSMDLRLLHGVAYGHSWFGKWGYRFCSGSFGVEEHH 60
Query: 291 YSKAVESLSSVPL-SNFFPHTRSPRNQLQ--NTIAFYQSLSRHPLTTIRELFAYIMELAT 347
Y +A+ L+S+ L + + R + L + + Y+ +S LTT+++L +++ + +
Sbjct: 61 YHRAIAFLTSISLVDDITANFRENKANLNIGDIVRCYRDMSEIQLTTLQDLLRFMLTIKS 120
>ATMG00550.1 | chrM:151265-151747 REVERSE LENGTH=161
Length = 160
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 258 DYRSLHAVATGCSWYGLWGFKLSSGSFGITPQDYSKAVESLSSVPL-SNFFPHTRSPRNQ 316
D R LH VA G SW+G WG++ SGSFG+ Y +A+ L+S+ L + + R +
Sbjct: 2 DLRLLHGVAYGHSWFGKWGYRFCSGSFGVEEHHYHRAIAFLTSISLVDDITANFRENKAN 61
Query: 317 LQ--NTIAFYQSLSRHPLTTIRELFAYIMELAT 347
L + + Y+ +S LTT+++L +++ + +
Sbjct: 62 LNIGDIVRCYRDMSEIQLTTLQDLLRFMLTIKS 94
>AT1G32810.2 | chr1:11881810-11885843 FORWARD LENGTH=1069
Length = 1068
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 624 WTVKCSCGATDDDGERMLSCDTCHMWMHTRCAGISDFDRVPKRYVCKSCK 673
WTV C CG DDDG M+ CD C +W+HTRC S F + + C CK
Sbjct: 22 WTVDCVCGVNDDDGTEMVKCDDCGVWVHTRC---SRFVEGQELFTCHKCK 68
>AT4G10600.1 | chr4:6547934-6548647 REVERSE LENGTH=238
Length = 237
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 622 DKWTVKCSCGATDDDGERMLSCDTCHMWMHTRCAGISDFDRVPKRYVCKSCKL 674
+ WTV C CG DDG+ M+ CD C +W+HT C+ D + +VC CK+
Sbjct: 10 ESWTVDCVCGVNFDDGKEMVDCDECGVWVHTWCSRYVKGDDL---FVCHKCKI 59
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,039,071
Number of extensions: 615494
Number of successful extensions: 1542
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1526
Number of HSP's successfully gapped: 10
Length of query: 715
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 609
Effective length of database: 8,200,473
Effective search space: 4994088057
Effective search space used: 4994088057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)