Os11g0218000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Eukaryotic transcription factor, DNA-binding domain containing protein.
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Os11g0218000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Eukaryotic transcription factor, DNA-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.54 | 0.264 | 12.9 | 0.614 | 1.93 | -0.587 | 0.329 | -1.87 | 0.155 | 6.6 | 23.07 | 5234 | -- | -- |
| 33.58 | 0.27 | 13 | 0.372 | 1.93 | -0.228 | 0.325 | -- | 0.101 | 6.59 | 38.2 | 6050 | -- | -- |
| 31.68 | 0.262 | 12.9 | 0.573 | 1.93 | -0.711 | -- | -2.12 | 0.153 | 6.58 | 22.4 | 5734 | -- | -- |
| 33.84 | 0.271 | 13 | 0.378 | 1.94 | -0.227 | -- | -- | 0.1 | 6.58 | 60.35 | 6055 | -- | -- |
| 225.71 | 0.7 | 12.9 | 0.664 | -- | -0.655 | -- | -1.96 | 0.177 | -- | 24.3 | 5688 | -- | -- |
| 34.46 | 0.275 | 12.9 | 0.483 | 1.93 | -- | 0.32 | -- | 0.152 | 6.58 | -- | -- | -- | -- |
| 34.71 | 0.276 | 12.9 | 0.487 | 1.94 | -- | -- | -- | 0.151 | 6.58 | -- | -- | -- | -- |
| 186.13 | 0.635 | 12.9 | 0.892 | -- | 1.7 | -- | -- | 0.428 | -- | 40.23 | 397 | -- | -- |
| 34.29 | 0.273 | 13 | -- | 1.93 | -0.416 | -- | -- | -0.0276 | 6.59 | 75.19 | 47520 | -- | -- |
| 229.75 | 0.708 | 13 | 0.534 | -- | -- | -- | -- | 0.191 | -- | -- | -- | -- | -- |
| 40.98 | 0.299 | 13 | -- | 1.94 | -- | -- | -- | 0.0968 | 6.56 | -- | -- | -- | -- |
| 205.61 | 0.668 | 13 | -- | -- | 1.4 | -- | -- | 0.294 | -- | 64.29 | 392 | -- | -- |
| 237.28 | 0.719 | 13 | -- | -- | -- | -- | -- | 0.131 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.84 | radiation | 1.0 | 30 | > th | dose dependent | sin | 10 | NA |
| 2 | 28.92 | radiation | 40.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 8 | 29.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 22 | 29.32 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 16 | 18 |
| 24 | 29.34 | humidity | 90.0 | 10 | < th | dose independent | rect. | 7 | 3 |
| 26 | 29.40 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 4 |
| 27 | 29.42 | radiation | 40.0 | 270 | < th | dose independent | rect. | 9 | 20 |
| 41 | 29.43 | radiation | 1.0 | 30 | > th | dose independent | rect. | 7 | 3 |
| 45 | 29.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 3 |
| 61 | 29.47 | radiation | 30.0 | 270 | < th | dose independent | rect. | 10 | 4 |
| 62 | 29.47 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 21 |
| 63 | 29.47 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 21 |
| 78 | 29.60 | wind | 7.0 | 10 | < th | dose independent | rect. | 10 | 21 |
| 81 | 29.62 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 83 | 29.62 | temperature | 15.0 | 30 | > th | dose independent | rect. | 10 | 21 |
| 84 | 29.62 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 88 | 29.64 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 3 |
| 89 | 29.64 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 3 |
| 91 | 29.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 94 | 29.64 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 3 |
| 95 | 29.64 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 3 |
| 96 | 29.64 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 99 | 29.64 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 3 |
| 102 | 29.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 111 | 29.65 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 13 |
| 146 | 29.67 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 21 |
| 147 | 29.69 | radiation | 10.0 | 90 | < th | dose independent | sin | 10 | NA |
| 148 | 29.69 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 3 |
| 149 | 29.69 | radiation | 10.0 | 30 | > th | dose independent | rect. | 16 | 18 |
| 163 | 29.77 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 165 | 29.79 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 20 |
| 166 | 29.79 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 173 | 29.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 10 | 6 |
| 176 | 29.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 191 | 29.86 | wind | 7.0 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 194 | 29.87 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 3 |
| 202 | 29.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 11 |
| 203 | 29.89 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 11 |
| 215 | 29.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 11 |
| 216 | 29.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 11 |
| 221 | 29.91 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 13 |
| 225 | 29.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 2 |
| 226 | 29.92 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 18 | 11 |
| 234 | 29.94 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 4 |
| 236 | 29.95 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 239 | 29.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 11 |
| 244 | 29.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 11 |
| 246 | 29.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 11 |
| 247 | 29.97 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 272 | 29.99 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 276 | 30.00 | wind | 9.0 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 286 | 30.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 3 |
| 291 | 30.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 21 |
| 292 | 30.02 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 7 | 3 |
| 294 | 30.03 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 5 |
| 300 | 30.03 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 304 | 30.04 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 346 | 30.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 358 | 30.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 3 |
| 379 | 30.09 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 10 | 3 |
| 389 | 30.10 | humidity | 50.0 | 30 | > th | dose independent | rect. | 16 | 18 |
| 395 | 30.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 6 |
| 403 | 30.11 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 10 |
| 416 | 30.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 421 | 30.12 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 423 | 30.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 13 |
| 424 | 30.12 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 427 | 30.12 | temperature | 30.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 454 | 30.13 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 4 |
| 456 | 30.13 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 21 |
| 459 | 30.15 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 463 | 30.15 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 22 | 12 |
| 498 | 30.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 13 |
| 512 | 30.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 13 |
| 519 | 30.20 | radiation | 10.0 | 90 | > th | dose independent | sin | 10 | NA |
| 527 | 30.20 | wind | 9.0 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 532 | 30.22 | temperature | 30.0 | 30 | < th | dose independent | rect. | 7 | 3 |
| 533 | 30.22 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 5 |
| 534 | 30.22 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 536 | 30.22 | humidity | 80.0 | 10 | < th | dose independent | rect. | 2 | 8 |
| 538 | 30.22 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 10 | 3 |
| 560 | 30.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 10 | 6 |
| 579 | 30.29 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 587 | 30.30 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 1 |
| 595 | 30.31 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 610 | 30.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 21 |
| 722 | 30.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 10 | 6 |
| 724 | 30.42 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 10 | 6 |
| 728 | 30.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 16 | 18 |
| 737 | 30.43 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 6 |
| 741 | 30.43 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 6 |
| 759 | 30.44 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 767 | 30.45 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 16 | 18 |
| 795 | 30.48 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 802 | 30.49 | wind | 9.0 | 30 | < th | dose independent | rect. | 10 | 6 |
| 805 | 30.49 | wind | 9.0 | 30 | < th | dose independent | rect. | 16 | 18 |
| 818 | 30.50 | radiation | 1.0 | 30 | > th | dose independent | rect. | 10 | 6 |
| 848 | 30.54 | wind | 1.0 | 720 | > th | dose independent | rect. | 17 | 5 |
| 855 | 30.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 858 | 30.55 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 874 | 30.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 3 |
| 881 | 30.57 | temperature | 25.0 | 720 | < th | dose independent | rect. | 22 | 3 |
| 895 | 30.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 10 |
| 900 | 30.59 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 905 | 30.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 909 | 30.60 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 6 |
| 912 | 30.60 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 21 |
| 913 | 30.60 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 10 | 21 |
| 987 | 30.66 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 2 |