BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0218000 Os11g0218000|AK072267
(364 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58110.1 | chr1:21515919-21517374 REVERSE LENGTH=375 186 1e-47
AT1G35490.1 | chr1:13061856-13063166 FORWARD LENGTH=301 115 4e-26
AT4G06598.1 | chr4:3663945-3665395 FORWARD LENGTH=342 110 1e-24
AT3G58120.1 | chr3:21521289-21523078 REVERSE LENGTH=330 92 3e-19
AT2G42380.2 | chr2:17647205-17648660 REVERSE LENGTH=322 92 5e-19
AT5G04840.1 | chr5:1406005-1407648 FORWARD LENGTH=308 72 4e-13
AT1G06070.1 | chr1:1835201-1837116 REVERSE LENGTH=424 66 3e-11
AT1G43700.1 | chr1:16484352-16486017 FORWARD LENGTH=342 64 1e-10
AT2G40620.1 | chr2:16954804-16956872 REVERSE LENGTH=368 63 3e-10
AT2G31370.3 | chr2:13379448-13381072 FORWARD LENGTH=399 62 4e-10
AT4G38900.1 | chr4:18139564-18141520 REVERSE LENGTH=554 60 1e-09
AT1G06850.1 | chr1:2105233-2106518 FORWARD LENGTH=338 60 2e-09
AT2G21230.3 | chr2:9093920-9096059 REVERSE LENGTH=526 55 7e-08
>AT1G58110.1 | chr1:21515919-21517374 REVERSE LENGTH=375
Length = 374
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 175/317 (55%), Gaps = 34/317 (10%)
Query: 56 QRTSSES-FIEEQPSWLDDLLNE-PETPVRQHGRAGHRRSSSDSXXXXXXXXXXXXXXXX 113
QRTSSES +EE P WLDDLLNE PE+P R + GHRRSSSDS
Sbjct: 60 QRTSSESHLVEELPFWLDDLLNEQPESPAR---KCGHRRSSSDSYAYLDVANATNISLTL 116
Query: 114 XXXXXXXXXXXXXXXXXXVQEY----------YAKPSSFGRHQGRPWEQGMNNLVNYRQS 163
VQE + +SF + + R ++LV +
Sbjct: 117 QNDFSYRNTVLSTQRG--VQELDRNKNAQDAAFYSGASFLKQKSRQ----RDSLV---AT 167
Query: 164 GGPP--MPAKEKVGGHHGSPSVLRDHDHGM---DRRSSDE-SGHDQKVGPERKEGVPPKH 217
G P +P + GG ++ D + +R++ E HD K+ + P
Sbjct: 168 GACPSWLPFARENGGGKNLGALYMSQDATVISSERKNYAEPFSHDPKMLSSEENNSNPSP 227
Query: 218 AQSEAD-TKRAKQQYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDL 276
EAD TKRAKQQ+AQRSRVRKLQYI+ELER VQ LQ+EG VSAE++FL+Q+N++L +
Sbjct: 228 VTYEADNTKRAKQQFAQRSRVRKLQYISELERNVQTLQAEGSKVSAELDFLNQRNLILSM 287
Query: 277 ENKALKQRLESLAQEQLIKRFQQEMFEREIGRLRSLYXXXXXXXXXXXXXXXLSRSNSRD 336
ENKALK+RLES+AQE+LIK+ +QE+ E+EIGRLR+LY R+ S+D
Sbjct: 288 ENKALKKRLESIAQEKLIKQLEQEVLEKEIGRLRALYQQQQQTQKPSASR---GRATSKD 344
Query: 337 LDSQFANLSLKHKDPNS 353
LDSQF++LSL KD N
Sbjct: 345 LDSQFSSLSLNTKDSNC 361
>AT1G35490.1 | chr1:13061856-13063166 FORWARD LENGTH=301
Length = 300
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 44/251 (17%)
Query: 63 FIEEQPSWLDDLLNEPETPVRQHGRAGHRRSSSDSXXXXXXXXXXXXXXXXXXXXXXXXX 122
F E+QP+WLD+LL+EP +P GHRRS+SD+
Sbjct: 49 FTEDQPAWLDELLSEPASP---KINKGHRRSASDTAAYLNSALMPSKENHVAGSSWQ--- 102
Query: 123 XXXXXXXXXVQEY-YAKPSSFGRHQGRPWEQGMNNLVNYRQSGGPPMPAKEKVGGHHGSP 181
Q Y + +S+ +H W+ + + G + G + S
Sbjct: 103 ---------FQNYDLWQSNSYEQHNKLGWD--------FSTANGTNIQRNMSCGALNMSS 145
Query: 182 SVLRDHDHGMDRRSSDESGHDQKVGPERKEGVP--PKHAQSEADTKRAKQQYAQRSRVRK 239
+ H M KEG P +S+ D+KR K Q A R+R+R+
Sbjct: 146 KPIEKHVSKM------------------KEGTSTKPDGPRSKTDSKRIKHQNAHRARLRR 187
Query: 240 LQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLENKALKQRLESLAQEQLIKRFQQ 299
L+YI++LER +Q LQ EG ++S+ + +L QQ +ML +EN+ALKQR++SLA+ Q +K +Q
Sbjct: 188 LEYISDLERTIQVLQVEGCEMSSAIHYLDQQLLMLSMENRALKQRMDSLAEIQKLKHVEQ 247
Query: 300 EMFEREIGRLR 310
++ EREIG L+
Sbjct: 248 QLLEREIGNLQ 258
>AT4G06598.1 | chr4:3663945-3665395 FORWARD LENGTH=342
Length = 341
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 84/146 (57%), Gaps = 29/146 (19%)
Query: 208 ERKEGVPPKHAQSEADTKRAKQQYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFL 267
E+++ K A SEADTKRA+QQ+AQRSRVRK+QYIAELER VQ
Sbjct: 218 EKRDNPLAKSATSEADTKRARQQFAQRSRVRKIQYIAELERNVQI--------------- 262
Query: 268 SQQNIMLDLENKALKQRLESLAQEQLIKRFQQEMFEREIGRLRSLY------XXXXXXXX 321
LENK+LK RLESLAQEQLIK + ++ E+EI RLR+LY
Sbjct: 263 --------LENKSLKNRLESLAQEQLIKYLEHDVLEKEIVRLRALYQLQQQQEPQQQHQT 314
Query: 322 XXXXXXXLSRSNSRDLDSQFANLSLK 347
RS SRDL++QF NLSL+
Sbjct: 315 KKQGSSSHQRSKSRDLETQFTNLSLR 340
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/42 (85%), Positives = 37/42 (88%), Gaps = 4/42 (9%)
Query: 57 RTSSESF-IEEQPSWLDDLLNEPETPVRQHGRAGHRRSSSDS 97
RTSSESF IEEQPSWLDDLLNEPETPVR + GHRRSSSDS
Sbjct: 61 RTSSESFLIEEQPSWLDDLLNEPETPVR---KGGHRRSSSDS 99
>AT3G58120.1 | chr3:21521289-21523078 REVERSE LENGTH=330
Length = 329
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 64/87 (73%)
Query: 227 AKQQYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLENKALKQRLE 286
A +Q AQRSRVRKLQYI+ELER V +LQ+E +S + FL Q ++L+++N A+KQR+
Sbjct: 211 ANRQSAQRSRVRKLQYISELERSVTSLQTEVSVLSPRVAFLDHQRLLLNVDNSAIKQRIA 270
Query: 287 SLAQEQLIKRFQQEMFEREIGRLRSLY 313
+LAQ+++ K QE +REI RLR +Y
Sbjct: 271 ALAQDKIFKDAHQEALKREIERLRQVY 297
>AT2G42380.2 | chr2:17647205-17648660 REVERSE LENGTH=322
Length = 321
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 64/87 (73%)
Query: 227 AKQQYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLENKALKQRLE 286
A +Q AQRSRVRKLQYI+ELER V +LQ+E +S + FL Q ++L+++N ALKQR+
Sbjct: 195 ANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIA 254
Query: 287 SLAQEQLIKRFQQEMFEREIGRLRSLY 313
+L+Q++L K QE +REI RLR +Y
Sbjct: 255 ALSQDKLFKDAHQEALKREIERLRQVY 281
>AT5G04840.1 | chr5:1406005-1407648 FORWARD LENGTH=308
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 227 AKQQYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLENKALKQRLE 286
AK+ QRSRVRKLQYIAELER V LQ+ D+S + L Q L LEN LKQ++
Sbjct: 177 AKRNPGQRSRVRKLQYIAELERTVGMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMA 236
Query: 287 SLAQEQLIKRFQQEMFEREIGRLRS 311
L Q++LI+ + ++ ++E RL+S
Sbjct: 237 ILKQDKLIREGEYQLLKKEAQRLKS 261
>AT1G06070.1 | chr1:1835201-1837116 REVERSE LENGTH=424
Length = 423
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 206 GPERKEGVPPKHAQSEA--------DTKRAKQ-----QYAQRSRVRKLQYIAELERKVQA 252
G E GV K A S A D KRAK+ Q A RS+ RK++YIAELERKVQ
Sbjct: 185 GNEDVSGVDSKKAISAAKLSELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQT 244
Query: 253 LQSEGIDVSAEMEFLSQQNIMLDLENKALKQRLESLAQEQLIKRFQQEMFEREIGRLRSL 312
LQ+E +SA++ L + L +EN LK R++++ Q+ ++ + + E+ L+ L
Sbjct: 245 LQTEATSLSAQLTLLQRDTNGLGVENNELKLRVQTMEQQVHLQDALNDALKEEVQHLKVL 304
>AT1G43700.1 | chr1:16484352-16486017 FORWARD LENGTH=342
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 223 DTKRAKQ-----QYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLE 277
D KRAK+ Q A RS+ RK++Y ELERKVQ LQ+E +SA++ L + L+ E
Sbjct: 194 DPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNTE 253
Query: 278 NKALKQRLESLAQEQLIKRFQQEMFEREIGRLRSL 312
NK LK RL++L Q+ ++ E E+ RL+ +
Sbjct: 254 NKHLKMRLQALEQQAELRDALNEALRDELNRLKVV 288
>AT2G40620.1 | chr2:16954804-16956872 REVERSE LENGTH=368
Length = 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 222 ADTKRAKQ-----QYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDL 276
D KRAK+ Q A RS+ RK +YI ELERKVQ LQ+E +SA++ + L
Sbjct: 147 VDPKRAKRIIANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLSLFQRDTTGLSS 206
Query: 277 ENKALKQRLESLAQEQLIKRFQQEMFEREIGRLR 310
EN LK RL+ + Q+ ++ E ++E+ RL+
Sbjct: 207 ENTELKLRLQVMEQQAKLRDALNEQLKKEVERLK 240
>AT2G31370.3 | chr2:13379448-13381072 FORWARD LENGTH=399
Length = 398
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 223 DTKRAKQ-----QYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLE 277
D KRAK+ Q A RS+ RK +YI ELERKVQ LQ+E +SA++ L + L +E
Sbjct: 201 DPKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVE 260
Query: 278 NKALKQRLESLAQEQLIKRFQQEMFEREIGRLRSL 312
N LK RL+++ Q+ ++ E + EI L+ L
Sbjct: 261 NNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVL 295
>AT4G38900.1 | chr4:18139564-18141520 REVERSE LENGTH=554
Length = 553
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 227 AKQQYAQRSRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDLENKALKQRLE 286
A +Q A RS+ RK++YI ELE KVQ LQ+E +SA++ L + + L +N LK RL+
Sbjct: 409 ANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQLTLLQRDMMGLTNQNNELKFRLQ 468
Query: 287 SLAQEQLIKRFQQEMFEREIGRLR 310
++ Q+ ++ E E+ RL+
Sbjct: 469 AMEQQARLRDALNEALNGEVQRLK 492
>AT1G06850.1 | chr1:2105233-2106518 FORWARD LENGTH=338
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 208 ERKEGVPPKHAQS--EADTKRAKQ-----QYAQRSRVRKLQYIAELERKVQALQSEGIDV 260
+ K+ +PP+ D KRAK+ Q A RS+ RK +YI ELERKVQ+LQ+E +
Sbjct: 131 DAKKAMPPEKLSELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQSLQTEATTL 190
Query: 261 SAEMEFLSQQNIMLDLENKALKQRLESLAQEQLIKRFQQEMFEREIGRLR 310
SA++ + L EN LK RL+++ Q+ ++ E +E+ R++
Sbjct: 191 SAQLTLYQRDTNGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMK 240
>AT2G21230.3 | chr2:9093920-9096059 REVERSE LENGTH=526
Length = 525
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 13/101 (12%)
Query: 222 ADTKRAKQQYAQR-----SRVRKLQYIAELERKVQALQSEGIDVSAEMEFLSQQNIMLDL 276
AD KR K+ A R S+ RK +Y+AELE KVQ LQ+E +SA++ L + ++ L
Sbjct: 369 ADPKRVKRILANRVSAARSKERKTRYMAELEHKVQTLQTEATTLSAQLTHLQRDSMGLTN 428
Query: 277 ENKALKQRLESLAQE-------QLIKRFQQEMFEREIGRLR 310
+N LK RL+++ Q+ +IK +++ E E+ RL+
Sbjct: 429 QNSELKFRLQAMEQQAQLRDGMHIIKTLSEKLNE-EVQRLK 468
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,947,294
Number of extensions: 215830
Number of successful extensions: 807
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 799
Number of HSP's successfully gapped: 15
Length of query: 364
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 264
Effective length of database: 8,364,969
Effective search space: 2208351816
Effective search space used: 2208351816
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 112 (47.8 bits)