Os11g0163800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF793 family protein.
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Os11g0163800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF793 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.25 | 0.413 | 9.74 | 0.302 | 2.03 | -0.981 | -0.207 | 0.156 | 0.181 | 9.53 | 1.7 | 281 | -- | -- |
| 77.32 | 0.41 | 9.74 | 0.297 | 2.02 | -0.984 | -0.102 | -- | 0.179 | 9.55 | 1.68 | 283 | -- | -- |
| 77.35 | 0.41 | 9.74 | 0.292 | 2.03 | -0.985 | -- | 0.0464 | 0.181 | 9.54 | 1.71 | 280 | -- | -- |
| 77.35 | 0.41 | 9.74 | 0.297 | 2.02 | -0.984 | -- | -- | 0.179 | 9.55 | 1.68 | 283 | -- | -- |
| 106.55 | 0.481 | 9.58 | 0.269 | -- | -2.33 | -- | -0.656 | 0.539 | -- | 1.56 | 883 | -- | -- |
| 82.75 | 0.426 | 9.75 | 0.238 | 1.93 | -- | -0.227 | -- | 0.144 | 7.3 | -- | -- | -- | -- |
| 82.89 | 0.426 | 9.75 | 0.234 | 1.93 | -- | -- | -- | 0.144 | 7.3 | -- | -- | -- | -- |
| 86.9 | 0.434 | 9.76 | 0.384 | -- | -2.74 | -- | -- | 0.296 | -- | 1.67 | 880 | -- | -- |
| 79.57 | 0.415 | 9.74 | -- | 2 | -0.903 | -- | -- | 0.149 | 9.36 | 1.82 | 276 | -- | -- |
| 280.76 | 0.783 | 9.8 | 0.267 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 84.32 | 0.43 | 9.76 | -- | 1.93 | -- | -- | -- | 0.118 | 7.3 | -- | -- | -- | -- |
| 91.02 | 0.444 | 9.78 | -- | -- | -2.67 | -- | -- | 0.228 | -- | 1.61 | 879 | -- | -- |
| 282.64 | 0.785 | 9.8 | -- | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 71.03 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 22 |
| 3 | 71.26 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 10 | 71.86 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 22 |
| 13 | 71.99 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 17 | 72.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 19 | 72.16 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 32 | 72.40 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 33 | 72.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 36 | 72.40 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 40 | 72.40 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 45 | 72.40 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 46 | 72.40 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 47 | 72.40 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 51 | 72.49 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 55 | 72.55 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 22 |
| 56 | 72.55 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 22 |
| 58 | 72.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 59 | 72.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 61 | 72.68 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 62 | 72.69 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 3 |
| 63 | 72.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 69 | 72.74 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 12 |
| 70 | 72.76 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 10 |
| 72 | 72.80 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 73 | 72.81 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 78 | 72.85 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 79 | 72.85 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 81 | 72.87 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 90 | 72.94 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 22 |
| 102 | 73.00 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 2 |
| 103 | 73.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 105 | 73.00 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 2 |
| 106 | 73.00 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 109 | 73.00 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 112 | 73.00 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 2 |
| 116 | 73.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 22 |
| 123 | 73.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 11 |
| 124 | 73.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 129 | 73.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 2 |
| 132 | 73.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 2 |
| 149 | 73.13 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 11 |
| 176 | 73.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 11 |
| 177 | 73.19 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 178 | 73.19 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 180 | 73.20 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 184 | 73.22 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 12 |
| 188 | 73.25 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 199 | 73.28 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 203 | 73.32 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 220 | 73.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 237 | 73.47 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 247 | 73.52 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 287 | 73.64 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 288 | 73.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 296 | 73.66 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 304 | 73.68 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 6 | 6 |
| 307 | 73.69 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 311 | 73.71 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 317 | 73.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 10 |
| 323 | 73.73 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 358 | 73.81 | humidity | 90.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 363 | 73.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 364 | 73.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 366 | 73.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 367 | 73.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 370 | 73.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 371 | 73.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 372 | 73.82 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 378 | 73.82 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 382 | 73.83 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 385 | 73.83 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 386 | 73.83 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 387 | 73.83 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 399 | 73.86 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 408 | 73.89 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 17 | 19 |
| 409 | 73.90 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 410 | 73.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 412 | 73.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 439 | 73.97 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 448 | 74.02 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 2 |
| 468 | 74.06 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 474 | 74.08 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 18 | 18 |
| 506 | 74.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 508 | 74.15 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 23 | 13 |
| 515 | 74.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 13 |
| 523 | 74.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 527 | 74.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 544 | 74.21 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 553 | 74.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 13 |
| 563 | 74.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 582 | 74.27 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 583 | 74.27 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 5 | 7 |
| 624 | 74.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 656 | 74.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 660 | 74.35 | radiation | 10.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 665 | 74.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 687 | 74.39 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 19 |
| 703 | 74.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 742 | 74.48 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 764 | 74.50 | temperature | 15.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 814 | 74.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 818 | 74.57 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 830 | 74.59 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 834 | 74.60 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 5 |
| 845 | 74.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 5 |
| 846 | 74.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 853 | 74.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 854 | 74.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 855 | 74.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 856 | 74.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 857 | 74.64 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 871 | 74.66 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 872 | 74.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 3 |
| 873 | 74.67 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 877 | 74.67 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 879 | 74.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 3 |
| 895 | 74.69 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 898 | 74.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 899 | 74.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 900 | 74.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 903 | 74.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 908 | 74.71 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 911 | 74.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 3 |
| 913 | 74.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 915 | 74.72 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 916 | 74.72 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 919 | 74.73 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 934 | 74.74 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 935 | 74.74 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 6 | 4 |
| 950 | 74.75 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 12 |
| 959 | 74.76 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 6 |
| 968 | 74.76 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 11 |
| 987 | 74.77 | wind | 9.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 1000 | 74.79 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 10 |